RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 LYZL6O75951 148 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 ALX3O95076 343 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 LCATP04180 440 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 PATE4P0C8F1 98 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CBR1P16152 277 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 IGFBP3P17936 291 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 APEX1P27695 318 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CFPP27918 469 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 GNALP38405 381 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CA7P43166 264 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 FOXG1P55316 489 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF45Q02386 682 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 PMPCAQ10713 525 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 MALLQ13021 153 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF846Q147U1 533 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 TBC1D28Q2M2D7 210 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 RSPO1Q2MKA7 263 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 HIKESHIQ53FT3 197 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 SPANXN2Q5MJ10 180 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 TIMM23BQ5SRD1 257 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM27D1Q5T7N8 215 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 ZBTB37Q5TC79 503 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 COLCA1Q6ZS62 124 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 BHLHA15Q7RTS1 189 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CDH26Q8IXH8 852 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 STEAP2Q8NFT2 490 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 OR51A4Q8NGJ6 313 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 FGFBP3Q8TAT2 258 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 OR51E1Q8TCB6 317 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CPNE2Q96FN4 548 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 POM121L2Q96KW2 1035 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CMTM3Q96MX0 182 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 WDFY2Q96P53 400 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 BARHL1Q9BZE3 327 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 OPN3Q9H1Y3 402 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 SMURF1Q9HCE7 757 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 GPR84Q9NQS5 396 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 TBCCD1Q9NVR7 557 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 RABL2AQ9UBK7 228 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 EIF3KQ9UBQ5 218 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 PLEKHB1Q9UF11 243 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 RABL2BQ9UNT1 228 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CMAHPQ9Y471 501 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 PMF1-BGLAPU3KQ54 211 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 V9GYS6 101 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 MAP1BP46821 2468 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 FREM1Q5H8C1 2179 aa7.08□□□□□ -1.28
TOPBP1-202ENST00000503338 CELSR3Q9NYQ7 3312 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 A0A1B0GTI1 187 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 A0A1W2PPK0 400 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 C5orf49A4QMS7 147 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 OR5H1A6NKK0 313 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 IFITM5A6NNB3 132 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 A8MXE2 369 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 RGS5O15539 181 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 ICMTO60725 284 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 IGKV3-15P01624 115 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 ALDOBP05062 364 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 DBHP09172 617 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 CLEC2LP0C7M8 214 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 SLC2A1P11166 492 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 EPXP11678 715 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 RAB3AP20336 220 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 THBS4P35443 961 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 DDOSTP39656 456 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 ETV6P41212 452 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 MAP2K3P46734 347 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 BMXP51813 675 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 RIPPLY1Q0D2K3 151 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 PRR30Q53SZ7 412 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 CEP78Q5JTW2 689 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 IDNKQ5T6J7 187 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 MTFR2Q6P444 385 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 UTS2BQ765I0 119 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 LRRTM1Q86UE6 522 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 MDP1Q86V88 176 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 CXorf67Q86X51 503 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 FTMTQ8N4E7 242 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 NAXEQ8NCW5 288 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 CPEB3Q8NE35 698 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 SLC30A7Q8NEW0 376 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 SEMA6DQ8NFY4 1073 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 OR14K1Q8NGZ2 314 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 OR10AC1Q8NH08 325 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 SPSB4Q96A44 273 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 MUCL1Q96DR8 90 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 LRRC46Q96FV0 321 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 REEP6Q96HR9 211 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 TECTBQ96PL2 329 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 PPIL3Q9H2H8 161 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 CDH20Q9HBT6 801 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 PALMDQ9NP74 551 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 TMEM138Q9NPI0 162 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 TINAGQ9UJW2 476 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 MEMO1Q9Y316 297 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 N6AMT1Q9Y5N5 214 aa7.07□□□□□ -1.28
TOPBP1-202ENST00000503338 ANKRD11Q6UB99 2663 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms