RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 SERPINE2P07093 398 aa2.58□□□□□ -2
CALD1-224ENST00000498254 RPS17P08708 135 aaKnown RBP2.58□□□□□ -2
CALD1-224ENST00000498254 GGT1P19440 569 aa2.58□□□□□ -2
CALD1-224ENST00000498254 CSNK2A2P19784 350 aaPredicted RBP2.58□□□□□ -2
CALD1-224ENST00000498254 PSMB6P28072 239 aa2.58□□□□□ -2
CALD1-224ENST00000498254 HRH1P35367 487 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SLCO1A2P46721 670 aa2.58□□□□□ -2
CALD1-224ENST00000498254 VSNL1P62760 191 aa2.58□□□□□ -2
CALD1-224ENST00000498254 MXD1Q05195 221 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TSC22D1Q15714 1073 aa2.58□□□□□ -2
CALD1-224ENST00000498254 ZNF726P1Q15940 193 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TRMT5Q32P41 509 aaKnown RBP2.58□□□□□ -2
CALD1-224ENST00000498254 CCDC58Q4VC31 144 aa2.58□□□□□ -2
CALD1-224ENST00000498254 ACTBL2Q562R1 376 aa2.58□□□□□ -2
CALD1-224ENST00000498254 BRMS1LQ5PSV4 323 aa2.58□□□□□ -2
CALD1-224ENST00000498254 CASC10Q5T4H9 136 aa2.58□□□□□ -2
CALD1-224ENST00000498254 CCNJQ5T5M9 372 aa2.58□□□□□ -2
CALD1-224ENST00000498254 HES5Q5TA89 166 aa2.58□□□□□ -2
CALD1-224ENST00000498254 GPR107Q5VW38 600 aa2.58□□□□□ -2
CALD1-224ENST00000498254 FRMPD2BQ6IN97 320 aa2.58□□□□□ -2
CALD1-224ENST00000498254 FBXL22Q6P050 247 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SPESP1Q6UW49 350 aa2.58□□□□□ -2
CALD1-224ENST00000498254 C4orf22Q6V702 233 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TMEM179Q6ZVK1 233 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TMEM135Q86UB9 458 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SLC13A5Q86YT5 568 aaPredicted RBP2.58□□□□□ -2
CALD1-224ENST00000498254 ZNF584Q8IVC4 421 aa2.58□□□□□ -2
CALD1-224ENST00000498254 LYG1Q8N1E2 194 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TRAM1L1Q8N609 369 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SUMF2Q8NBJ7 301 aa2.58□□□□□ -2
CALD1-224ENST00000498254 OR4D6Q8NGJ1 314 aa2.58□□□□□ -2
CALD1-224ENST00000498254 LINC01006Q8NI28 216 aa2.58□□□□□ -2
CALD1-224ENST00000498254 LRRC29Q8WV35 223 aa2.58□□□□□ -2
CALD1-224ENST00000498254 KCTD4Q8WVF5 259 aa2.58□□□□□ -2
CALD1-224ENST00000498254 DGCR14Q96DF8 476 aaKnown RBP2.58□□□□□ -2
CALD1-224ENST00000498254 MBOAT7Q96N66 472 aa2.58□□□□□ -2
CALD1-224ENST00000498254 COL21A1Q96P44 957 aa2.58□□□□□ -2
CALD1-224ENST00000498254 NRIP2Q9BQI9 281 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SEC22CQ9BRL7 303 aa2.58□□□□□ -2
CALD1-224ENST00000498254 ZYG11BQ9C0D3 744 aa2.58□□□□□ -2
CALD1-224ENST00000498254 OR51B5Q9H339 312 aa2.58□□□□□ -2
CALD1-224ENST00000498254 TMEM38AQ9H6F2 299 aa2.58□□□□□ -2
CALD1-224ENST00000498254 WDR55Q9H6Y2 383 aaPredicted RBP2.58□□□□□ -2
CALD1-224ENST00000498254 SLC38A10Q9HBR0 1119 aa2.58□□□□□ -2
CALD1-224ENST00000498254 ZC4H2Q9NQZ6 224 aa2.58□□□□□ -2
CALD1-224ENST00000498254 DYRK4Q9NR20 520 aa2.58□□□□□ -2
CALD1-224ENST00000498254 CTPS2Q9NRF8 586 aa2.58□□□□□ -2
CALD1-224ENST00000498254 CMTM6Q9NX76 183 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SLC25A37Q9NYZ2 338 aa2.58□□□□□ -2
CALD1-224ENST00000498254 PCYOX1Q9UHG3 505 aa2.58□□□□□ -2
CALD1-224ENST00000498254 SHPKQ9UHJ6 478 aa2.58□□□□□ -2
CALD1-224ENST00000498254 C3orf18Q9UK00 162 aa2.58□□□□□ -2
CALD1-224ENST00000498254 PSMD13Q9UNM6 376 aa2.58□□□□□ -2
CALD1-224ENST00000498254 F11RQ9Y624 299 aaKnown RBP2.58□□□□□ -2
CALD1-224ENST00000498254 MROH7-TTC4A0A0A0MT08 1334 aa2.58□□□□□ -2
CALD1-224ENST00000498254 PCDH11XQ9BZA7 1347 aa2.58□□□□□ -2
CALD1-224ENST00000498254 POLR3AO14802 1390 aaPredicted RBP2.58□□□□□ -2
CALD1-224ENST00000498254 CEMIPQ8WUJ3 1361 aa2.58□□□□□ -2
CALD1-224ENST00000498254 A0A0J9YYE9 177 aa2.57□□□□□ -2
CALD1-224ENST00000498254 A0A1B0GW15 77 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ZNF98A6NK75 572 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ERI2A8K979 691 aaKnown RBP2.57□□□□□ -2
CALD1-224ENST00000498254 LYRM9A8MSI8 78 aa2.57□□□□□ -2
CALD1-224ENST00000498254 PDZK1P1A8MUH7 402 aa2.57□□□□□ -2
CALD1-224ENST00000498254 MIF4GDA9UHW6 222 aaKnown RBP2.57□□□□□ -2
CALD1-224ENST00000498254 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
CALD1-224ENST00000498254 H7C0C1 242 aa2.57□□□□□ -2
CALD1-224ENST00000498254 K7EMT4 169 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ITGB1BP1O14713 200 aa2.57□□□□□ -2
CALD1-224ENST00000498254 SRP72O76094 671 aaKnown RBP2.57□□□□□ -2
CALD1-224ENST00000498254 LYPLA2O95372 231 aa2.57□□□□□ -2
CALD1-224ENST00000498254 BRI3O95415 125 aa2.57□□□□□ -2
CALD1-224ENST00000498254 SNAP29O95721 258 aa2.57□□□□□ -2
CALD1-224ENST00000498254 TRBC1P01850 177 aa2.57□□□□□ -2
CALD1-224ENST00000498254 CALB1P05937 261 aa2.57□□□□□ -2
CALD1-224ENST00000498254 EIF4EP06730 217 aaKnown RBP2.57□□□□□ -2
CALD1-224ENST00000498254 RD3LP0DJH9 198 aa2.57□□□□□ -2
CALD1-224ENST00000498254 IGHV3-43DP0DP04 118 aa2.57□□□□□ -2
CALD1-224ENST00000498254 NR2C1P13056 603 aa2.57□□□□□ -2
CALD1-224ENST00000498254 GFAPP14136 432 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ZNF19P17023 458 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ZNF30P17039 623 aa2.57□□□□□ -2
CALD1-224ENST00000498254 PMCHP20382 165 aa2.57□□□□□ -2
CALD1-224ENST00000498254 MSR1P21757 451 aa2.57□□□□□ -2
CALD1-224ENST00000498254 CCNOP22674 350 aa2.57□□□□□ -2
CALD1-224ENST00000498254 HSD11B1P28845 292 aa2.57□□□□□ -2
CALD1-224ENST00000498254 IL12BP29460 328 aa2.57□□□□□ -2
CALD1-224ENST00000498254 SERPINB1P30740 379 aa2.57□□□□□ -2
CALD1-224ENST00000498254 CTRLP40313 264 aa2.57□□□□□ -2
CALD1-224ENST00000498254 RFC3P40938 356 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ACTR1BP42025 376 aa2.57□□□□□ -2
CALD1-224ENST00000498254 ATP5J2P56134 94 aa2.57□□□□□ -2
CALD1-224ENST00000498254 NUP107P57740 925 aa2.57□□□□□ -2
CALD1-224ENST00000498254 MLF1P58340 268 aa2.57□□□□□ -2
CALD1-224ENST00000498254 GNB2P62879 340 aa2.57□□□□□ -2
CALD1-224ENST00000498254 REEP5Q00765 189 aa2.57□□□□□ -2
CALD1-224ENST00000498254 DAZ2Q13117 558 aaKnown RBP2.57□□□□□ -2
CALD1-224ENST00000498254 STX3Q13277 289 aa2.57□□□□□ -2
CALD1-224ENST00000498254 USF2Q15853 346 aaPredicted RBP2.57□□□□□ -2
CALD1-224ENST00000498254 ZNF79Q15937 498 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms