RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 MMADHCQ9H3L0 296 aaPredicted RBP12.21□□□□□ -0.45
PDAP1-204ENST00000496335 SLC25A19Q9HC21 320 aa12.21□□□□□ -0.45
PDAP1-204ENST00000496335 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
PDAP1-204ENST00000496335 PAPOLBQ9NRJ5 636 aaKnown RBP12.21□□□□□ -0.45
PDAP1-204ENST00000496335 TMEM100Q9NV29 134 aa12.21□□□□□ -0.45
PDAP1-204ENST00000496335 MITFO75030 526 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-204ENST00000496335 MMP16P51512 607 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 CRISP1P54107 249 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 AMIGO2Q86SJ2 522 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 SPRYD4Q8WW59 207 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-204ENST00000496335 PLEKHA8Q96JA3 519 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 SIGLEC11Q96RL6 698 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
PDAP1-204ENST00000496335 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 AP4S1Q9Y587 144 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
PDAP1-204ENST00000496335 A0A1B0GWJ7 208 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 GGT3PA6NGU5 568 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 CD300LBA8K4G0 201 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 TMEM178BH3BS89 294 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SELENOFO60613 162 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 ZNF205O95201 554 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 ANPEPP15144 967 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SLC2A5P22732 501 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 CA6P23280 308 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 NAA10P41227 235 aaPredicted RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SLC15A1P46059 708 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 CX3CR1P49238 355 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 MAB21L1Q13394 359 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 PTGES3Q15185 160 aaKnown RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 ZMYND11Q15326 602 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SNAPC1Q16533 368 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 CXXC5Q7LFL8 322 aaKnown RBP12.19□□□□□ -0.46
PDAP1-204ENST00000496335 SHFQ7M4L6 423 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 MOGAT3Q86VF5 341 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 RNF133Q8WVZ7 376 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 LRTOMTQ8WZ04 291 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 DNAJC27Q9NZQ0 273 aa12.19□□□□□ -0.46
PDAP1-204ENST00000496335 TRAV20A0A0B4J274 112 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 G3V2T6 193 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 PRODHO43272 600 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 TBX1O43435 398 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 CYB5R3P00387 301 aaPredicted RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 ANXA2P07355 339 aaKnown RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 PCMT1P22061 227 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 FASP25445 335 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 HSD11B1P28845 292 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 EPHA2P29317 976 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 PMELP40967 661 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 OPRL1P41146 370 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 HCCSP53701 268 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 RPS7P62081 194 aaKnown RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 BTG1P62324 171 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 GRB2P62993 217 aaKnown RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 LCN2P80188 198 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 APOFQ13790 326 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 ASRGL1Q7L266 308 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 LRRC28Q86X40 367 aaPredicted RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 PARP8Q8N3A8 854 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 THEM6Q8WUY1 208 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 DUS3LQ96G46 650 aaKnown RBP12.18□□□□□ -0.46
PDAP1-204ENST00000496335 TEX12Q9BXU0 123 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 BRD7Q9NPI1 651 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 G6PC2Q9NQR9 355 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 KRT84Q9NSB2 600 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 PCDHB10Q9UN67 800 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 KLHDC2Q9Y2U9 406 aa12.18□□□□□ -0.46
PDAP1-204ENST00000496335 M0R129 80 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 PHF1O43189 567 aaPredicted RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 CIB2O75838 187 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 AVPP01185 164 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 LYNP07948 512 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 H2BFMP0C1H6 154 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 ZFP36P26651 326 aaKnown RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 ZNF121P58317 390 aaPredicted RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 OR8G1Q15617 311 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 MPPED2Q15777 294 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 SLC35D3Q5M8T2 416 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 FAM201AQ5SY85 155 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 PRSS45Q7RTY3 260 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 BCDIN3DQ7Z5W3 292 aaKnown RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 KLHL36Q8N4N3 616 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 SGK3Q96BR1 496 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 SEMA6AQ9H2E6 1030 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 TOR3AQ9H497 397 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
PDAP1-204ENST00000496335 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms