RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 UBAP1Q9NZ09 502 aa18.52■□□□□ 0.56
HPS3-207ENST00000494327 LPAR3Q9UBY5 353 aa18.52■□□□□ 0.56
HPS3-207ENST00000494327 GGT3PA6NGU5 568 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 F5H5P2 479 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 MLNRO43193 412 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 PRODHO43272 600 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 TBX1O43435 398 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 ANXA2P07355 339 aaKnown RBP18.51■□□□□ 0.55
HPS3-207ENST00000494327 SBK2P0C263 348 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 NAA10P41227 235 aaPredicted RBP18.51■□□□□ 0.55
HPS3-207ENST00000494327 CX3CR1P49238 355 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 ESRRGP62508 458 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 APOFQ13790 326 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 GLCCI1Q86VQ1 547 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 RNF133Q8WVZ7 376 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 PYDC1Q8WXC3 89 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 MEGF10Q96KG7 1140 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 AMELYQ99218 206 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 DNAJC27Q9NZQ0 273 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 TMEFF2Q9UIK5 374 aaPredicted RBP18.51■□□□□ 0.55
HPS3-207ENST00000494327 NPTNQ9Y639 398 aa18.51■□□□□ 0.55
HPS3-207ENST00000494327 SONP18583 2426 aaKnown RBP18.5■□□□□ 0.55
HPS3-207ENST00000494327 H2BFMP0C1H6 154 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 HNF1AP20823 631 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 SRP9P49458 86 aaKnown RBP18.5■□□□□ 0.55
HPS3-207ENST00000494327 SLC35D3Q5M8T2 416 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.5■□□□□ 0.55
HPS3-207ENST00000494327 RAB39BQ96DA2 213 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 TOR3AQ9H497 397 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 BRD7Q9NPI1 651 aa18.5■□□□□ 0.55
HPS3-207ENST00000494327 CD300LBA8K4G0 201 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 ANKRD65E5RJM6 399 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 IFNA2P01563 188 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 LYNP07948 512 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 MSMBP08118 114 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 FAM157CP0CG43 387 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 EPHA2P29317 976 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 DVL1P1P54792 670 aaPredicted RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 KPNB1Q14974 876 aaKnown RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 KDM4DQ6B0I6 523 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 OTOSQ8NHW6 89 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 ZNF420Q8TAQ5 688 aaPredicted RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 CENPNQ96H22 339 aaPredicted RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 REPIN1Q9BWE0 567 aaKnown RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 GABARAPL1Q9H0R8 117 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 GCM1Q9NP62 436 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 HIF1ANQ9NWT6 349 aa18.49■□□□□ 0.55
HPS3-207ENST00000494327 ANK3Q12955 4377 aaKnown RBP18.49■□□□□ 0.55
HPS3-207ENST00000494327 NAV3Q8IVL0 2385 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 SAC3D1A6NKF1 404 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 M0R129 80 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 PRKYO43930 277 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 IGHV2-5P01817 119 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 MRPL3P09001 348 aaKnown RBP18.48■□□□□ 0.55
HPS3-207ENST00000494327 ANPEPP15144 967 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 SRD5A1P18405 259 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 SLC2A5P22732 501 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 CA6P23280 308 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 HCCSP53701 268 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 RAD23AP54725 363 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 FAM57BQ71RH2 274 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 MOGAT3Q86VF5 341 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 ZNF454Q8N9F8 522 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 OR51F2Q8NH61 342 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 TMEM186Q96B77 213 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 TEAD3Q99594 435 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 PRRG3Q9BZD7 231 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 OAZ3Q9UMX2 235 aa18.48■□□□□ 0.55
HPS3-207ENST00000494327 MALRD1Q5VYJ5 2156 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 XRCC2O43543 280 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 APOC1P02654 83 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 OPRL1P41146 370 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 MMP16P51512 607 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 ZNF121P58317 390 aaPredicted RBP18.47■□□□□ 0.55
HPS3-207ENST00000494327 ACTR3P61158 418 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 OR8G1Q15617 311 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 TIGD6Q17RP2 521 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 BCDIN3DQ7Z5W3 292 aaKnown RBP18.47■□□□□ 0.55
HPS3-207ENST00000494327 TCEANCQ8N8B7 351 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 CIB1Q99828 191 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 SP140LQ9H930 580 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 H2AFY2Q9P0M6 372 aaPredicted RBP18.47■□□□□ 0.55
HPS3-207ENST00000494327 LAMP5Q9UJQ1 280 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 PCDHB10Q9UN67 800 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 KLHDC2Q9Y2U9 406 aa18.47■□□□□ 0.55
HPS3-207ENST00000494327 ZAR1LA6NP61 321 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 ZNF205O95201 554 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 CYB5R3P00387 301 aaPredicted RBP18.46■□□□□ 0.55
HPS3-207ENST00000494327 IGHV2-70P01814 119 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 GFOD2Q3B7J2 385 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 LCN1P1Q5VSP4 162 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 SLX4IPQ5VYV7 408 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 LRRN1Q6UXK5 716 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 SLC16A9Q7RTY1 509 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 PGAM5Q96HS1 289 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 SIGLEC11Q96RL6 698 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 PKP2Q99959 881 aa18.46■□□□□ 0.55
HPS3-207ENST00000494327 CCDC182A6NF36 153 aa18.45■□□□□ 0.54
HPS3-207ENST00000494327 TMEM178BH3BS89 294 aa18.45■□□□□ 0.54
HPS3-207ENST00000494327 PLPP2O43688 288 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms