RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CKAP4Q07065 602 aaKnown RBP4.11□□□□□ -1.75
SMC2-205ENST00000493955 TMED1Q13445 227 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 TSC22D1Q15714 1073 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 AADACL4Q5VUY2 407 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 CYB5R2Q6BCY4 276 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 ADAMTS13Q76LX8 1427 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 NPWQ8N729 165 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 MDS2Q8NDY4 140 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 FBXO36Q8NEA4 188 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 OR6Q1Q8NGQ2 317 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 LRRC29Q8WV35 223 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 NTAN1Q96AB6 310 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 NRBF2Q96F24 287 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 PATZ1Q9HBE1 687 aaKnown RBP4.11□□□□□ -1.75
SMC2-205ENST00000493955 IFNKQ9P0W0 207 aa4.11□□□□□ -1.75
SMC2-205ENST00000493955 TRMT112Q9UI30 125 aaKnown RBP4.11□□□□□ -1.75
SMC2-205ENST00000493955 MARF1Q9Y4F3 1742 aaKnown RBP4.1□□□□□ -1.75
SMC2-205ENST00000493955 ASXL1Q8IXJ9 1541 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 RGS12O14924 1447 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 IGHV3-74A0A0B4J1X5 117 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 PINLYPA6NC86 204 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 ERI3O43414 337 aaKnown RBP4.1□□□□□ -1.75
SMC2-205ENST00000493955 MPDU1O75352 247 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 TPM1P09493 284 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 ERGP11308 486 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 PTNP21246 168 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 HOXA9P31269 272 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 SERPINB8P50452 374 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 ETV1P50549 477 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 RAB7AP51149 207 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 PPP1CBP62140 327 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
SMC2-205ENST00000493955 ART3Q13508 389 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 CHRFAM7AQ494W8 412 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 ARL9Q6T311 187 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 FBXW12Q6X9E4 464 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 SNX31Q8N9S9 440 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 OR10AD1Q8NGE0 317 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 OR51L1Q8NGJ5 315 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 GAL3ST2Q9H3Q3 398 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 NEU3Q9UQ49 428 aa4.1□□□□□ -1.75
SMC2-205ENST00000493955 BZW2Q9Y6E2 419 aaKnown RBP4.1□□□□□ -1.75
SMC2-205ENST00000493955 SPHKAPQ2M3C7 1700 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 IQGAP3Q86VI3 1631 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 TRPM2O94759 1503 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 ADGRL2O95490 1459 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 FGD6Q6ZV73 1430 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 RIMS2Q9UQ26 1411 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 JCADQ9P266 1359 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 TRBV6-6A0A0A6YYG2 114 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 CENPXA8MT69 81 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 INS-IGF2F8WCM5 200 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 H0Y9J4 135 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 KDELR3O43731 214 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 GABARAPO95166 117 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 PRPS2P11908 318 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 ADRB3P13945 408 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 USF1P22415 310 aaPredicted RBP4.09□□□□□ -1.75
SMC2-205ENST00000493955 IL32P24001 234 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 FABP6P51161 128 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 CCR6P51684 374 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 CDH17Q12864 832 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 SLC39A6Q13433 755 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 C2orf83Q53S99 150 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 TPRG1LQ5T0D9 272 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 DNAJC24Q6P3W2 148 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 PLET1Q6UQ28 207 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 WDR82Q6UXN9 313 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 NCCRP1Q6ZVX7 275 aaPredicted RBP4.09□□□□□ -1.75
SMC2-205ENST00000493955 UNC93AQ86WB7 457 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 NOXO1Q8NFA2 376 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 OR4A15Q8NGL6 344 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 RNF138Q8WVD3 245 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 MRGPRFQ96AM1 343 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 NAA50Q9GZZ1 169 aaKnown RBP4.09□□□□□ -1.75
SMC2-205ENST00000493955 XKR8Q9H6D3 395 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 UBE2ZQ9H832 354 aaPredicted RBP4.09□□□□□ -1.75
SMC2-205ENST00000493955 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
SMC2-205ENST00000493955 KPTNQ9Y664 436 aa4.09□□□□□ -1.75
SMC2-205ENST00000493955 SETBP1Q9Y6X0 1596 aa4.09□□□□□ -1.76
SMC2-205ENST00000493955 CARMIL3Q8ND23 1372 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 BRWD3Q6RI45 1802 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 MROH7Q68CQ1 1323 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 IGHV3-66A0A0C4DH42 116 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 WI2-2373I1.2A0A1W2PRP0 233 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 A8MU10 97 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 H7C1H1 209 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 H7C417 338 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CDC40O60508 579 aaKnown RBP eCLIP4.08□□□□□ -1.76
SMC2-205ENST00000493955 HLA-DPB1P04440 258 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 KLK1P06870 262 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CCNG1P51959 295 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CLDN6P56747 220 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 YWHAEP62258 255 aaKnown RBP4.08□□□□□ -1.76
SMC2-205ENST00000493955 RCAN2Q14206 197 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 PON2Q15165 354 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 METTL21CQ5VZV1 264 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 RWDD4Q6NW29 188 aaKnown RBP4.08□□□□□ -1.76
SMC2-205ENST00000493955 LINC00336Q6ZUF6 198 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms