RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ZMAT3Q9HA38 289 aaKnown RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 PROK2Q9HC23 129 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 TMEM138Q9NPI0 162 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 G6PC2Q9NQR9 355 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 CENPMQ9NSP4 180 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 IGHG1P01857 330 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 SP9P0CG40 484 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PGA4P0DJD7 388 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PGA3P0DJD8 388 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 ZNF35P13682 527 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 SCAND1P57086 179 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 MLF1P58340 268 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 FLI1Q01543 452 aaPredicted RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 MUC3AQ02505 3323 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 BIVMQ86UB2 503 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 NOXO1Q8NFA2 376 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 RNF133Q8WVZ7 376 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 OXGR1Q96P68 337 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PISDQ9UG56 409 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 OR52A1Q9UKL2 312 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 NAP1L6A6NFF2 107 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 SULT2B1O00204 365 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 EIF1AYO14602 144 aaKnown RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 RAMP1O60894 148 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 GLSO94925 669 aaPredicted RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 NDUFB6O95139 128 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 IGHEP01854 428 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 CD2P06729 351 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ZNF806P0C7X5 589 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 GTF2F2P13984 249 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 CFPP27918 469 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 LAP3P28838 519 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 H2BFSP57053 126 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 CSRP2Q16527 193 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ELFN2Q5R3F8 820 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 C11orf88Q6PI97 169 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 OR51S1Q8NGJ8 323 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 GTF3AQ92664 365 aaKnown RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 GNRHR2Q96P88 292 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 SH2D2AQ9NP31 389 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 PADI1Q9ULC6 663 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 TMEM269A0A1B0GVZ9 245 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 G3V3Y1 287 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 GOSR2O14653 212 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 TERTO14746 1132 aaKnown RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 RBBP9O75884 186 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ITGA5P08648 1049 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 RRASP10301 218 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 NR2C1P13056 603 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ZNF43P17038 809 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 KLK2P20151 261 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 SLC35A1P78382 337 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ZNF239Q16600 458 aaKnown RBP12.22□□□□□ -0.45
VCP-207ENST00000493886 ZNF626Q68DY1 528 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 TMPPEQ6ZT21 453 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 HHLA2Q9UM44 414 aa12.22□□□□□ -0.45
VCP-207ENST00000493886 AQP7P3A6NL99 342 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 ACSM4P0C7M7 580 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 LIFP15018 202 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 EIF1AXP47813 144 aaKnown RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 PAN3Q58A45 887 aaKnown RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 CARD17Q5XLA6 110 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 OLFML2AQ68BL7 652 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 HDDC2Q7Z4H3 204 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 OR1J4Q8NGS1 313 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 OR6X1Q8NH79 312 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 NTNG2Q96CW9 530 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 JSRP1Q96MG2 331 aaPredicted RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 CHST6Q9GZX3 395 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 ARL6Q9H0F7 186 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 CKLFQ9UBR5 152 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 AUP1Q9Y679 476 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 LOC107986453A0A1B0GWG9 222 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 PLSCR5A0PG75 271 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 LY86O95711 162 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 ISG15P05161 165 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 ACHEP22303 614 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 NFYAP23511 347 aaPredicted RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 OTX2P32243 289 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 MNDAP41218 407 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 DSCR4P56555 118 aaPredicted RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 PPP1R32Q7Z5V6 425 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 TNFAIP8L1Q8WVP5 186 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 LINC00052Q96N35 136 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.45
VCP-207ENST00000493886 TAS2R4Q9NYW5 299 aa12.21□□□□□ -0.45
VCP-207ENST00000493886 TCFL5Q9UL49 500 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms