RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 HSPB2Q16082 182 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 SMIM21Q3B7S5 101 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 ETV3LQ6ZN32 361 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 SLC39A11Q8N1S5 342 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 DUS3LQ96G46 650 aaKnown RBP7.15□□□□□ -1.26
BRCA1-221ENST00000493795 C1QTNF6Q9BXI9 259 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 C1SP09871 688 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 ALDOCP09972 364 aaKnown RBP7.15□□□□□ -1.26
BRCA1-221ENST00000493795 NID1P14543 1247 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 ZP3P21754 424 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 SDHAP31040 664 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 LIPAP38571 399 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 NPY5RQ15761 445 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 TOMM34Q15785 309 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM241Q24JQ0 296 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 NXPE3Q969Y0 559 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 C19orf43Q9BQ61 176 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 CLEC2DQ9UHP7 191 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 UFC1Q9Y3C8 167 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 C7orf72A4D263 438 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 CLDN34H7C241 214 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 CSF2RBP32927 897 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 G6PCP35575 357 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 HOXA4Q00056 320 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 SSBP1Q04837 148 aaKnown RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF260Q3ZCT1 412 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ABLIM2Q6H8Q1 611 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM64Q6YI46 380 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 GALNT16Q8N428 558 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 EXD3Q8N9H8 876 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 OR4D10Q8NGI6 311 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ZIC5Q96T25 663 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 NIPSNAP1Q9BPW8 284 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 KLF16Q9BXK1 252 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM38AQ9H6F2 299 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ADGRL4Q9HBW9 690 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM9BQ9NQ34 198 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 AMDHD2Q9Y303 409 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 A0A0U1RQS6 177 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 M0R135 149 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 SMAD6O43541 496 aaKnown RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TEAD1P28347 426 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 KIR2DL1P43626 348 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 KIR2DL2P43627 348 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 NTHL1P78549 312 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 MRPS21P82921 87 aaKnown RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 EGR3Q06889 387 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 LRRC10Q5BKY1 277 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF343Q6P1L6 599 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 HTR3DQ70Z44 454 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 LRP11Q86VZ4 500 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 OR5M1Q8NGP8 315 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ISL2Q96A47 359 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TM4SF18Q96CE8 201 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 MISP3Q96FF7 219 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF799Q96GE5 643 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 ATOH8Q96SQ7 321 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 CXorf36Q9H7Y0 433 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 WASHC3Q9Y3C0 194 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 DCCP43146 1447 aa7.15□□□□□ -1.27
BRCA1-221ENST00000493795 TBX19O60806 448 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SNAI1O95863 264 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-221ENST00000493795 OPRM1P35372 400 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 CLDN20P56880 219 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SMAGPQ0VAQ4 97 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 PRDX4Q13162 271 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 AMMECR1LQ6DCA0 310 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 RBPMS2Q6ZRY4 209 aaKnown RBP7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SFTPA2Q8IWL1 248 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SFTPA1Q8IWL2 248 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 IL22RA2Q969J5 263 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 RAB37Q96AX2 223 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 UBE2ZQ9H832 354 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SLIT3O75094 1523 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 M0QZQ0 153 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 NUDT3O95989 172 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 FUCA1P04066 466 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 TFAP2AP05549 437 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SP1P08047 785 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 IVDP26440 423 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 OPRK1P41145 380 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 LIPNQ5VXI9 398 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SLC48A1Q6P1K1 146 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 SPNS3Q6ZMD2 512 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 LINC00299Q6ZSB3 139 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 LMO3Q8TAP4 145 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 MARCH1Q8TCQ1 289 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 LRRC15Q8TF66 581 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 RTN4IP1Q8WWV3 396 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-221ENST00000493795 Q96M85 177 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 GPR137Q96N19 417 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 TEAD3Q99594 435 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 MS4A8Q9BY19 250 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 MMP26Q9NRE1 261 aa7.14□□□□□ -1.27
BRCA1-221ENST00000493795 UQCC1Q9NVA1 299 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms