RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 ECH1Q13011 328 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 GK2Q14410 553 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 KRTAP27-1Q3LI81 207 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 COLCA1Q6ZS62 124 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 DCXRQ7Z4W1 244 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 SPATA24Q86W54 205 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 HS3ST5Q8IZT8 346 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF283Q8N7M2 679 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 OR2T33Q8NG76 320 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 OR6K6Q8NGW6 343 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 OR13G1Q8NGZ3 307 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 SLC7A6OSQ96CW6 309 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 RBM4Q9BWF3 364 aaKnown RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 HCAR1Q9BXC0 346 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 GCM1Q9NP62 436 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 G6PC2Q9NQR9 355 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 CENPMQ9NSP4 180 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 PDP1Q9P0J1 537 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 PCDHB10Q9UN67 800 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 COMMD3-BMI1R4GMX3 469 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 DHRS12A0PJE2 317 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 IQCF6A8MYZ5 107 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 M0R135 149 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SURF4O15260 269 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 CYB5R3P00387 301 aaPredicted RBP8.97□□□□□ -0.97
COL6A3-214ENST00000493608 PNPP00491 289 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SLC2A1P11166 492 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 ADRA2CP18825 462 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 ZFP36P26651 326 aaKnown RBP8.97□□□□□ -0.97
COL6A3-214ENST00000493608 THBS2P35442 1172 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SLC6A9P48067 706 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SEC61A1P61619 476 aaKnown RBP8.97□□□□□ -0.97
COL6A3-214ENST00000493608 MALLQ13021 153 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 ZMYND11Q15326 602 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SNAI3Q3KNW1 292 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SHQ1Q6PI26 577 aaKnown RBP8.97□□□□□ -0.97
COL6A3-214ENST00000493608 MOGAT3Q86VF5 341 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 OR2AE1Q8NHA4 323 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 TEX47Q8TBZ9 253 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 ST7LQ8TDW4 575 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SPTSSAQ969W0 71 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF799Q96GE5 643 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SIGLEC11Q96RL6 698 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 SLC30A2Q9BRI3 323 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 TMPRSS13Q9BYE2 586 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 NMNAT2Q9BZQ4 307 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 TMEM100Q9NV29 134 aa8.97□□□□□ -0.97
COL6A3-214ENST00000493608 A6NHS1 94 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 AQP12BA6NM10 295 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 RIIAD1A6NNX1 92 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 TMEM178BH3BS89 294 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 TCF21O43680 179 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 IFNGP01579 166 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 PMELP40967 661 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 ENTPD1P49961 510 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 SLC25A1P53007 311 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 BTG1P62324 171 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 HOXA4Q00056 320 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF92Q03936 586 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 FLOT2Q14254 428 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 GINS1Q14691 196 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 TAF13Q15543 124 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 FAM201AQ5SY85 155 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 DCAF12L2Q5VW00 463 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 SLC27A4Q6P1M0 643 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 CD300LDQ6UXZ3 194 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 PGAP1Q75T13 922 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 LRRC28Q86X40 367 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-214ENST00000493608 AQP12AQ8IXF9 295 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 C19orf18Q8NEA5 215 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 DVL3Q92997 716 aaPredicted RBP8.96□□□□□ -0.98
COL6A3-214ENST00000493608 SLAMF6Q96DU3 332 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 COPS4Q9BT78 406 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 C19orf24Q9BVV8 132 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 OR51V1Q9H2C8 321 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 MMP26Q9NRE1 261 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 CMC2Q9NRP2 79 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 UFSP2Q9NUQ7 469 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 KCNG2Q9UJ96 466 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 BAIAP2Q9UQB8 552 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 STAB1Q9NY15 2570 aa8.96□□□□□ -0.98
COL6A3-214ENST00000493608 A0A0G2JMP0 313 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 A0A0X1KG70 313 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 KRTAP9-6A0A140TA67 174 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 TRAPPC2LH3BP13 241 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 E2F6O75461 281 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 DNAJC8O75937 253 aaPredicted RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 VENTXO95231 258 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF3P17036 446 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 CA6P23280 308 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 SRP9P49458 86 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 CBX1P83916 185 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 MAB21L1Q13394 359 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 EIF2B1Q14232 305 aaKnown RBP8.95□□□□□ -0.98
COL6A3-214ENST00000493608 DNAL1Q4LDG9 190 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 GLYATL3Q5SZD4 288 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 LINC01590Q5TEZ4 76 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 PRAMEF6Q5VXH4 476 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 LIPNQ5VXI9 398 aa8.95□□□□□ -0.98
COL6A3-214ENST00000493608 TMEM236Q5W0B7 351 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms