RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 GSTT2P0CG29 244 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 COX5AP20674 150 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 CFL1P23528 166 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 OPRM1P35372 400 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 CX3CR1P49238 355 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 NKX2-5P52952 324 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 CASP6P55212 293 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 CAV3P56539 151 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 INSL4Q14641 139 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 IGFBP7Q16270 282 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 BCL2L15Q5TBC7 163 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM91Q6ZNR0 172 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 GABRG1Q8N1C3 465 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF433Q8N7K0 673 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF283Q8N7M2 679 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 SPTSSAQ969W0 71 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 WNT5BQ9H1J7 359 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 OPN3Q9H1Y3 402 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 MOB1AQ9H8S9 216 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 FAM206AQ9NX38 181 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC22A13Q9Y226 551 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 RTTNQ86VV8 2226 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 LINC00854A0A1B0GVQ3 168 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 CIB4A0PJX0 185 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 E9PLN8 166 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 F5H5K5 113 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 LYZL6O75951 148 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 UBL3O95164 117 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 HLA-HP01893 362 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 APOC1P02654 83 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 CD79AP11912 226 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 ARR3P36575 388 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 RPS11P62280 158 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 IFITM2Q01629 132 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 P2RY6Q15077 328 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 ODF4Q2M2E3 257 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 TBRG1Q3YBR2 411 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 ACSM3Q53FZ2 586 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 MZT2AQ6P582 158 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 CNIH2Q6PI25 160 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 C1orf162Q8NEQ5 155 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 OR13C5Q8NGS8 318 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 NANOS1Q8WY41 292 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 VKORC1Q9BQB6 163 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 PPP1R3EQ9H7J1 279 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM165Q9HC07 324 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 RBMX2Q9Y388 322 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-210ENST00000492909 A0A0G2JNJ9 132 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 SHISA3A0PJX4 238 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 PLA2G10O15496 165 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 HPGDSO60760 199 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RAD51DO75771 328 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 GATBO75879 557 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 HTR5AP47898 357 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC6A9P48067 706 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF121P58317 390 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RIN1Q13671 783 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 PAMR1Q6UXH9 720 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF704Q6ZNC4 412 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 CEACAM19Q7Z692 300 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 CCDC36Q8IYA8 594 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 CAPSLQ8WWF8 208 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RGP1Q92546 391 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 PPP1R14AQ96A00 147 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 PBOV1Q9GZY1 135 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 MMP28Q9H239 520 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 Q9UFV3 132 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 N6AMT1Q9Y5N5 214 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 M0R135 149 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RGS13O14921 159 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 CRYGSP22914 178 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 EVX1P49640 407 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RAB1AP62820 205 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 GABRA6Q16445 453 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 NDUFA5Q16718 116 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ELMOD2Q8IZ81 293 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 GPR148Q8TDV2 347 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 BOD1Q96IK1 185 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 OR14A2Q96R54 314 aa12.28□□□□□ -0.44
PDZRN3-210ENST00000492909 PIGMQ9H3S5 423 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms