RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ADH4P08319 380 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 DDOSTP39656 456 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 PSG7Q13046 419 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 GK2Q14410 553 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 SNAI3Q3KNW1 292 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 FAM209AQ5JX71 171 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 RNLSQ5VYX0 342 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 SSX6Q7RTT6 188 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 NAA40Q86UY6 237 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 CMBLQ96DG6 245 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 TMEM80Q96HE8 168 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 TBX5Q99593 518 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 FOXC2Q99958 501 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 ZNF649Q9BS31 505 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 FKBP14Q9NWM8 211 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 ERVK13-1Q9NX77 482 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 SCN3BQ9NY72 215 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 NUFIP1Q9UHK0 495 aaKnown RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 PURGQ9UJV8 347 aaKnown RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 EXOSC1Q9Y3B2 195 aaKnown RBP13.56□□□□□ -0.24
TRA2A-208ENST00000490942 SNX5Q9Y5X3 404 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 R4GMQ9 66 aa13.56□□□□□ -0.24
TRA2A-208ENST00000490942 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 ERCC1P07992 297 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-208ENST00000490942 RPSAP08865 295 aaKnown RBP13.55□□□□□ -0.24
TRA2A-208ENST00000490942 MYL12AP19105 171 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 PCGF3Q3KNV8 242 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 SPATA46Q5T0L3 261 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 FDX2Q6P4F2 183 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 YIPF7Q8N8F6 280 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 GGHQ92820 318 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 PGAM5Q96HS1 289 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 DIRC2Q96SL1 478 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 SYT3Q9BQG1 590 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 ALG8Q9BVK2 526 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 CACNG6Q9BXT2 260 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 DYNLRB1Q9NP97 96 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 NKIRAS2Q9NYR9 191 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
TRA2A-208ENST00000490942 A0A1B0GWJ7 208 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 PLSCR5A0PG75 271 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 IQCF6A8MYZ5 107 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 LOC110117498-PIK3R3F6TDL0 507 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 SLC1A7O00341 560 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 CLPTM1O96005 669 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 SLC2A1P11166 492 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 MPV17P39210 176 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 MMP15P51511 669 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 GLYATL3Q5SZD4 288 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 PRSS57Q6UWY2 283 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 MRPL21Q7Z2W9 205 aaKnown RBP13.54□□□□□ -0.24
TRA2A-208ENST00000490942 LRP11Q86VZ4 500 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 BPIFB6Q8NFQ5 453 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-208ENST00000490942 SGK3Q96BR1 496 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 SLC22A4Q9H015 551 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 RAB1BQ9H0U4 201 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 CXXC4Q9H2H0 198 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 POFUT1Q9H488 388 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 CHCHD3Q9NX63 227 aaKnown RBP13.54□□□□□ -0.24
TRA2A-208ENST00000490942 PTTG3PQ9NZH4 202 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 BLOC1S6Q9UL45 172 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
TRA2A-208ENST00000490942 CAB39Q9Y376 341 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-208ENST00000490942 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
TRA2A-208ENST00000490942 LOC390937A0A1W2PQ73 354 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 PSMD9O00233 223 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 IGLV3-1P01715 115 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 LIMS3P0CW19 117 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 LIMS4P0CW20 117 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 PTH2RP49190 550 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 CCR9P51686 369 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 ZNF92Q03936 586 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 ST3GAL4Q11206 333 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 TIGD6Q17RP2 521 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 KRT74Q7RTS7 529 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 ELMOD2Q8IZ81 293 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 FTMTQ8N4E7 242 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 ZNF540Q8NDQ6 660 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 OR8B12Q8NGG6 310 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 RORBQ92753 470 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 MYDGFQ969H8 173 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 REEP6Q96HR9 211 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 SIGLEC11Q96RL6 698 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 PBOV1Q9GZY1 135 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 DUSP21Q9H596 190 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 MYOZ1Q9NP98 299 aaPredicted RBP13.53□□□□□ -0.24
TRA2A-208ENST00000490942 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
TRA2A-208ENST00000490942 MYEF2Q9P2K5 600 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms