RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SEC61A2Q9H9S3 476 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 GPR35Q9HC97 309 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 B3GAT2Q9NPZ5 323 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 TRIM36Q9NQ86 728 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 ACOXLQ9NUZ1 547 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 PARPBPQ9NWS1 579 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 SLCO1C1Q9NYB5 712 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 CYB5R1Q9UHQ9 305 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 GNG8Q9UK08 70 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 GRIP1Q9Y3R0 1128 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 LHFPL6Q9Y693 200 aa6.58□□□□□ -1.36
CLDN1-202ENST00000490800 RTTNQ86VV8 2226 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 FLNAP21333 2647 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 H7C1Q1 480 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 OGG1O15527 345 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 AIREO43918 545 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 MRPL33O75394 65 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 SULT1C4O75897 302 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LY6G6DO95868 133 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 KRT8P05787 483 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 CELP19835 753 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 PSMB1P20618 241 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 MSR1P21757 451 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 PCSK6P29122 969 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 TGFBR1P36897 503 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 PSMB10P40306 273 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 TGM4P49221 684 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF84P51523 738 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 TAS2R43P59537 309 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 VBP1P61758 197 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 NCS1P62166 190 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LSM3P62310 102 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LSM6P62312 80 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 MRPS34P82930 218 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ROM1Q03395 351 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 GPR50Q13585 617 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ENDOGQ14249 297 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 SPCS2Q15005 226 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 CDK5R1Q15078 307 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 SGCAQ16586 387 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LIPNQ5VXI9 398 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 DMKNQ6E0U4 476 aaPredicted RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 CORO6Q6QEF8 472 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ARL9Q6T311 187 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LRRN1Q6UXK5 716 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF704Q6ZNC4 412 aaPredicted RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 FAM220AQ7Z4H9 259 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 DCXRQ7Z4W1 244 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 GABRG1Q8N1C3 465 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 YIPF7Q8N8F6 280 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 OR10S1Q8NGN2 331 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 OR52N5Q8NH56 324 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 RPS4Y2Q8TD47 263 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 S100PBPQ96BU1 408 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 TRMT61AQ96FX7 289 aaKnown RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 MAP6Q96JE9 813 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ALKBH3Q96Q83 286 aaPredicted RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 MYCBPQ99417 103 aaPredicted RBP6.57□□□□□ -1.36
CLDN1-202ENST00000490800 CHCHD6Q9BRQ6 235 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM204Q9BSN7 226 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 HDHD5Q9BXW7 423 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 SLCO5A1Q9H2Y9 848 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 ELOVL3Q9HB03 270 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 CRLF2Q9HC73 371 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 SLC7A10Q9NS82 523 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 IKZF2Q9UKS7 526 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 STUB1Q9UNE7 303 aa6.57□□□□□ -1.36
CLDN1-202ENST00000490800 LOC100506127A0A0U1RQW1 187 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 A0A1W2PPW3 197 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 OR6C65A6NJZ3 312 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 RPL36A-HNRNPH2H7BZ11 118 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 SLC22A1O15245 554 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PLPP2O43688 288 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TMCC2O75069 709 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 RPP14O95059 124 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 IGHV3-9P01782 118 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TACSTD2P09758 323 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 NPR2P20594 1047 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PSMA1P25786 263 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 GABRA5P31644 462 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 OPRL1P41146 370 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 PTH2RP49190 550 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 NANOS3P60323 173 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 FABP5Q01469 135 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 ROR2Q01974 943 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 SLC3A1Q07837 685 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 MRPL28Q13084 256 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TAB1Q15750 504 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 STK11Q15831 433 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 CEACAM16Q2WEN9 425 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 CCDC58Q4VC31 144 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TM4SF20Q53R12 229 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 FAM27BQ5VT28 67 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 RPL22L1Q6P5R6 122 aaKnown RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 KCTD18Q6PI47 426 aaPredicted RBP6.56□□□□□ -1.36
CLDN1-202ENST00000490800 CD200R1LQ6Q8B3 271 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 TFAP2EQ6VUC0 442 aa6.56□□□□□ -1.36
CLDN1-202ENST00000490800 GDPGP1Q6ZNW5 385 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms