RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PRR19A6NJB7 356 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 H7C1Q1 480 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 GAAP10253 952 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 PTAFRP25105 342 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 PPP1R32Q7Z5V6 425 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 OR4D11Q8NGI4 311 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 SLC7A6Q92536 515 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 GFOD1Q9NXC2 390 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 HSPB2A8KAH6 182 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 GPANK1O95872 356 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 HSPB2Q16082 182 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 UBE2NLQ5JXB2 153 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZNF808Q8N4W9 903 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 CREBBPQ92793 2442 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 A0A0A6YYH2 397 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 A0A0J9YW62 118 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 A6NJ64 397 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 ANK1P16157 1881 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 GIFP27352 417 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 SELENOPP49908 381 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 TAS2R31P59538 309 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 COMTD1Q86VU5 262 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 ST7LQ8TDW4 575 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 LRP12Q9Y561 859 aa12.84□□□□□ -0.35
ARHGEF39-205ENST00000490638 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 RGS11O94810 467 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 IGKV1D-16P01601 117 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CLDN20P56880 219 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 HES1Q14469 280 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ESCO2Q56NI9 601 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 AADACL3Q5VUY0 350 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 LAX1Q8IWV1 398 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CITED4Q96RK1 184 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 RHNO1Q9BSD3 238 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 MBD2Q9UBB5 411 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 HMX3A6NHT5 357 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 SH2D1BO14796 132 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CD3EP07766 207 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 COX6A1P12074 109 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CDK2P24941 298 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 SRP9P49458 86 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF81P51508 661 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CDK5Q00535 292 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 PCOLCEQ15113 449 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ETV7Q9Y603 341 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 VWA8A3KMH1 1905 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 MED13LQ71F56 2210 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CCL2P13500 99 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CD59P13987 128 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 PTGER4P35408 488 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CLVS2Q5SYC1 327 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 ASB5Q8WWX0 329 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
ARHGEF39-205ENST00000490638 CDC14BO60729 498 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 ALDOBP05062 364 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 C12orf73Q69YU5 71 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 APOOLQ6UXV4 268 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 ALG5Q9Y673 324 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 TSPAN2O60636 221 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 GABARAPO95166 117 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 SOX18P35713 384 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 ETFDHQ16134 617 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 FZR1Q9UM11 496 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 PATJQ8NI35 1801 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 PDCD11Q14690 1871 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 SIRPB1O00241 398 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 MT-ND4P03905 459 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 F2RL1P55085 397 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 TSEN54Q7Z6J9 526 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 OR13G1Q8NGZ3 307 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 ZFP57Q9NU63 452 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 FNDC1Q4ZHG4 1894 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 TUBAL3A6NHL2 446 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 E9PI62 339 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 MPZL1O95297 269 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 EPPINO95925 133 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 RPS19P39019 145 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 CYCSP99999 105 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 DOC2BQ14184 412 aa12.82□□□□□ -0.36
ARHGEF39-205ENST00000490638 TMEM200AQ86VY9 491 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms