RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TPRKBQ9Y3C4 175 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 NFASCO94856 1347 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ANK1P16157 1881 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 A0A1B0GV90 55 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TCRBV3S1A0A5B6 114 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TUBAL3A6NHL2 446 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SIRPB1O00241 398 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF195O14628 629 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 B4GAT1O43505 415 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 APOC3P02656 99 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RLN2P04090 185 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KLK1P06870 262 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ACSM4P0C7M7 580 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RAB3BP20337 219 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PVALBP20472 110 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CRHBPP24387 322 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 INPP1P49441 399 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 VEGFCP49767 419 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 UGT2B15P54855 530 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 XGP55808 180 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TIMM10P62072 90 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 FGL1Q08830 312 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 GPR18Q14330 331 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PSMD5Q16401 504 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RFX4Q33E94 735 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KIAA1644Q3SXP7 199 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 AKIRIN2Q53H80 203 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TEX30Q5JUR7 227 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CASC10Q5T4H9 136 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 IRAK1BP1Q5VVH5 260 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 XAF1Q6GPH4 301 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ADAM5Q6NVV9 412 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TEX261Q6UWH6 196 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 STRADAQ7RTN6 431 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CATSPERDQ86XM0 798 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 GPR65Q8IYL9 337 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 DAW1Q8N136 415 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 LRRC75AQ8NAA5 344 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CA5BP1Q8WTZ4 195 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CANT1Q8WVQ1 401 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SLC45A3Q96JT2 553 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PPP3R2Q96LZ3 170 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 NEDD4LQ96PU5 975 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ACTR6Q9GZN1 396 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SLIRPQ9GZT3 109 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ASB7Q9H672 318 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RNF121Q9H920 327 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PATZ1Q9HBE1 687 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ADAP2Q9NPF8 381 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SDHAF2Q9NX18 166 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 OPTCQ9UBM4 332 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SEC14L4Q9UDX3 406 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SSR3Q9UNL2 185 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ORC6Q9Y5N6 252 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 U3KQ87 197 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PATJQ8NI35 1801 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF729A6NN14 1252 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SULT1C2O00338 296 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MYL12BO14950 172 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SLC31A2O15432 143 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 AIREO43918 545 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 BANF1O75531 89 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 POP7O75817 140 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CD36P16671 472 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MYL12AP19105 171 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 HLA-DMAP28067 261 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ATP12AP54707 1039 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RPL8P62917 257 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PSPHP78330 225 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 DEFA5Q01523 94 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 IL18R1Q13478 541 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 FZD2Q14332 565 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SMCO1Q147U7 214 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 OR2G6Q5TZ20 316 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 GLYATQ6IB77 296 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 HAGHLQ6PII5 290 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 Q6ZRP5 223 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 GALNT10Q86SR1 603 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MS4A15Q8N5U1 240 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF557Q8N988 423 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CYB561A3Q8NBI2 242 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SDR9C7Q8NEX9 313 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 VN1R2Q8NFZ6 395 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 OR5L2Q8NGL0 311 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PCNPQ8WW12 178 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MRPS31Q92665 395 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 LINC00052Q96N35 136 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 COPS8Q99627 209 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 LXNQ9BS40 222 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 GSDMCQ9BYG8 508 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 HDHD2Q9H0R4 259 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 C20orf85Q9H1P6 137 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MMP28Q9H239 520 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 NXF3Q9H4D5 531 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 C11orf49Q9H6J7 331 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 EXOSC3Q9NQT5 275 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 FAM49BQ9NUQ9 324 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 BABAM2Q9NXR7 383 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 WWOXQ9NZC7 414 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PTTG3PQ9NZH4 202 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms