RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 PLPP7Q8NBV4 271 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 OR51A4Q8NGJ6 313 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 TSEN15Q8WW01 171 aaKnown RBP12.3□□□□□ -0.44
VPS26A-205ENST00000489656 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 SLC25A46Q96AG3 418 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 KCNS3Q9BQ31 491 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 OR10A4Q9H209 315 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 NOX4Q9NPH5 578 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 ZNF319Q9P2F9 582 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 CRNNQ9UBG3 495 aaPredicted RBP12.3□□□□□ -0.44
VPS26A-205ENST00000489656 ZNF391Q9UJN7 358 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 DHDHQ9UQ10 334 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 A3GALT2U3KPV4 340 aa12.3□□□□□ -0.44
VPS26A-205ENST00000489656 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
VPS26A-205ENST00000489656 A0A1B0GVI7 797 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 J3QW42 95 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 SYT7O43581 403 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 ICMTO60725 284 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 CD2P06729 351 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 FSTP19883 344 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 ANOS1P23352 680 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 IL32P24001 234 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 APLNRP35414 380 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
VPS26A-205ENST00000489656 DOK3Q7L591 496 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 LUZP2Q86TE4 346 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 LIX1LQ8IVB5 337 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 GALNT11Q8NCW6 608 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 STEAP2Q8NFT2 490 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 OR51E1Q8TCB6 317 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 ITFG2Q969R8 447 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 TMEM106AQ96A25 262 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 SLIRPQ9GZT3 109 aaKnown RBP12.29□□□□□ -0.44
VPS26A-205ENST00000489656 NXF2Q9GZY0 626 aaKnown RBP12.29□□□□□ -0.44
VPS26A-205ENST00000489656 RGCCQ9H4X1 137 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 GPR84Q9NQS5 396 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 SLC25A15Q9Y619 301 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 KALRNO60229 2985 aa12.29□□□□□ -0.44
VPS26A-205ENST00000489656 LOC390937A0A1W2PQ73 354 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 EEF1E1-BLOC1S5C9J1V9 151 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 CCL21O00585 134 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 CASKO14936 926 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 EEF1E1O43324 174 aaKnown RBP12.28□□□□□ -0.44
VPS26A-205ENST00000489656 XRCC2O43543 280 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 IGLV1-44P01699 117 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 LCATP04180 440 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SRMP19623 302 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SOX6P35712 828 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 MAGEB1P43366 347 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SOX2P48431 317 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 RORCP51449 518 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SNAI3Q3KNW1 292 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SLC25A35Q3KQZ1 300 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 LINC00299Q6ZSB3 139 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 CROCCP3Q8IVE0 287 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 PARP16Q8N5Y8 322 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SLC30A7Q8NEW0 376 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 OR1J2Q8NGS2 313 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 OR13C3Q8NGS6 347 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
VPS26A-205ENST00000489656 SNTG1Q9NSN8 517 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 FOXJ3Q9UPW0 622 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 PMF1-BGLAPU3KQ54 211 aa12.28□□□□□ -0.44
VPS26A-205ENST00000489656 C5orf49A4QMS7 147 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 ANKRD61A6NGH8 418 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 TBX1O43435 398 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 CFL1P23528 166 aaKnown RBP12.27□□□□□ -0.45
VPS26A-205ENST00000489656 CHRNB4P30926 498 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 MXD1Q05195 221 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 MRPL49Q13405 166 aaKnown RBP12.27□□□□□ -0.45
VPS26A-205ENST00000489656 FBXL19-AS1Q494R0 122 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 OR14K1Q8NGZ2 314 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 SPSB4Q96A44 273 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.45
VPS26A-205ENST00000489656 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 C10orf35Q96D05 121 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 LYZL4Q96KX0 146 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 BARHL1Q9BZE3 327 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 SLITRK2Q9H156 845 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 ZCCHC4Q9H5U6 513 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 V9GYS6 101 aa12.27□□□□□ -0.45
VPS26A-205ENST00000489656 A0A075B6Q4 140 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 A0A0G2JK05 382 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 A0A1B0GUH1 482 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 A0A1W2PPK0 400 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 A0A1W2PR80 420 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 PDCD5O14737 125 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 TMEM127O75204 238 aa12.26□□□□□ -0.45
VPS26A-205ENST00000489656 MTRF1O75570 445 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms