RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LRRC18Q8N456 261 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 MAPK1IP1LQ8NDC0 245 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 OR2T27Q8NH04 317 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ABHD6Q9BV23 337 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 TTTY10Q9BZA0 68 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 PLK3Q9H4B4 646 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 INPP5EQ9NRR6 644 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ASH2LQ9UBL3 628 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 CSPG4Q6UVK1 2322 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 NIPBLQ6KC79 2804 aaeCLIP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 INAFM1C9JVW0 142 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 NDUFS8O00217 210 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 CCRL2O00421 344 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 RER1O15258 196 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 AIREO43918 545 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 LALBAP00709 142 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 PTHP01270 115 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ERCC1P07992 297 aaPredicted RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF35P13682 527 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF32P17041 273 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 NR4A1P22736 598 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 PCSK6P29122 969 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ATP6V1E1P36543 226 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 PDLIM4P50479 330 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 RPS23P62266 143 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ROM1Q03395 351 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 KRTAP1-1Q07627 177 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 SNTB2Q13425 540 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 AQP6Q13520 282 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 GALEQ14376 348 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 SPHARQ15513 63 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MED22Q15528 200 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MOGQ16653 247 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 KRTAP27-1Q3LI81 207 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 CDONQ4KMG0 1287 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 OR2G6Q5TZ20 316 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 USP43Q70EL4 1123 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 DCXRQ7Z4W1 244 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 LHFPL3Q86UP9 236 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF584Q8IVC4 421 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ACBD7Q8N6N7 88 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 NANOGP1Q8N7R0 232 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 OR10H4Q8NGA5 316 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 S100ZQ8WXG8 99 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 SORCS2Q96PQ0 1159 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MNTQ99583 582 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MGLLQ99685 303 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 VRK1Q99986 396 aaPredicted RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 RAB1BQ9H0U4 201 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 WNT5BQ9H1J7 359 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 ISG20L2Q9H9L3 353 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 SLCO1C1Q9NYB5 712 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 MRM2Q9UI43 246 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 CMAHPQ9Y471 501 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 A3GALT2U3KPV4 340 aa9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 FN1P02751 2386 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 HEATR1Q9H583 2144 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-208ENST00000489554 A0A096LNT2 108 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 TMEM129A0AVI4 362 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 OR6C6A6NF89 314 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SYNGR3O43761 229 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 CD5LO43866 347 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SRSF10O75494 262 aaKnown RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 CLPXO76031 633 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SERPINA5P05154 406 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF823P16415 610 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 PSMA1P25786 263 aaKnown RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SOX6P35712 828 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 GLRXP35754 106 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 OPRL1P41146 370 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 EVX1P49640 407 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 RGS6P49758 472 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 ACTC1P68032 377 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 ACTA1P68133 377 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 PSG4Q00888 419 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 GALK2Q01415 458 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 MLLT11Q13015 90 aaPredicted RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 DCTN2Q13561 401 aaKnown RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 EIF2B1Q14232 305 aaKnown RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SLC36A2Q495M3 483 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 TMEM53Q6P2H8 277 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF322Q6U7Q0 402 aaPredicted RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 TMPRSS11AQ6ZMR5 421 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SLC16A14Q7RTX9 510 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SYT9Q86SS6 491 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 SLAMF6Q96DU3 332 aa9.07□□□□□ -0.96
SCAMP4-208ENST00000489554 OR5M11Q96RB7 305 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms