RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GSG1Q2KHT4 349 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 TMEM176BQ3YBM2 270 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 SLC25A25Q6KCM7 469 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF529Q6P280 563 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 LRFN4Q6PJG9 635 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 Q6ZS46 218 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 LUZP2Q86TE4 346 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 VASH2Q86V25 355 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 LYPD6Q86Y78 171 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 UBE2J2Q8N2K1 259 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 SLC22A24Q8N4F4 322 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 ASCC1Q8N9N2 400 aaKnown RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 GJC3Q8NFK1 279 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 OR10AC1Q8NH08 325 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 OR52I2Q8NH67 350 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 SLC25A28Q96A46 364 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 RADILQ96JH8 1075 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 BBC3Q96PG8 261 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 NPAS1Q99742 590 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 MESP1Q9BRJ9 268 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 C20orf85Q9H1P6 137 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 OR51J1Q9H342 316 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 NELFAQ9H3P2 528 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 CDCP1Q9H5V8 836 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 METTL17Q9H7H0 456 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 GPN1Q9HCN4 374 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 RANGRFQ9HD47 186 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 HRASLSQ9HDD0 168 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 GHRLQ9UBU3 117 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 DKKL1Q9UK85 242 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 FLVCR1Q9Y5Y0 555 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 ATMQ13315 3056 aa7.48□□□□□ -1.21
VTI1A-207ENST00000489357 TNRC6AQ8NDV7 1962 aaKnown RBP7.48□□□□□ -1.21
VTI1A-207ENST00000489357 A0A0U1RQV5 110 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1B0GTH9 108 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1W2PPL8 197 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CIB4A0PJX0 185 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 DHRS7CA6NNS2 312 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 NPIPA2E9PIF3 369 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 NPIPA3F8WFD2 350 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 MSTNO14793 375 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 SYT7O43581 403 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ZIC3O60481 467 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 NDUFB6O95139 128 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 TTRP02766 147 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ALDOBP05062 364 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 LPLP06858 475 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ACSM4P0C7M7 580 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 UBBP0CG47 229 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 AKAIN1P0CW23 69 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CCL3P10147 92 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 TBPP20226 339 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 MSR1P21757 451 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 S100A1P23297 94 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 VAMP1P23763 118 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 BDKRB2P30411 391 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 DLSTP36957 453 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CSNK1A1P48729 337 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 SRP9P49458 86 aaKnown RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 FOXL2P58012 376 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 TAS2R19P59542 299 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 HIST1H3AP68431 136 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 MRPS34P82930 218 aaKnown RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CD83Q01151 205 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ECH1Q13011 328 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 C2orf76Q3KRA6 126 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 NRN1LQ496H8 165 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 RIPPLY2Q5TAB7 128 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 HIST2H3PS2Q5TEC6 136 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 PCSK4Q6UW60 755 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF782Q6ZMW2 699 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF813Q6ZN06 617 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 Q6ZSR3 168 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ESPNLQ6ZVH7 1005 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CREB3L2Q70SY1 520 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 HIST2H3AQ71DI3 136 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 DOK3Q7L591 496 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 OR2W3Q7Z3T1 314 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 PPP1R32Q7Z5V6 425 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 GPAT4Q86UL3 456 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 BEST3Q8N1M1 668 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 KDM8Q8N371 416 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 OR51D1Q8NGF3 324 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 SPOCK3Q9BQ16 436 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 PBOV1Q9GZY1 135 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ALX4Q9H161 411 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 AUNIPQ9H7T9 357 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 PROK2Q9HC23 129 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF160Q9HCG1 818 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 MYOZ1Q9NP98 299 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 GLTPQ9NZD2 209 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ABI3Q9P2A4 366 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 UPB1Q9UBR1 384 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF391Q9UJN7 358 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 ING1Q9UK53 422 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-207ENST00000489357 RAB22AQ9UL26 194 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 CLEC4AQ9UMR7 237 aa7.47□□□□□ -1.21
VTI1A-207ENST00000489357 GTF2A1LQ9UNN4 478 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms