RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF260Q3ZCT1 412 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 OR2W3Q7Z3T1 314 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 ARMC8Q8IUR7 673 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 CNPY4Q8N129 248 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 C11orf42Q8N5U0 333 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 BBS10Q8TAM1 723 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 LYZL4Q96KX0 146 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 DUX3Q96PT4 197 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 TSPYL1Q9H0U9 437 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 ZFP57Q9NU63 452 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 ASIC5Q9NY37 505 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 SLC25A10Q9UBX3 287 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-233ENST00000489352 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1W2PPH5 198 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 E9PBE3 544 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 ACOT8O14734 319 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 PLIN3O60664 434 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 TRIM13O60858 407 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 ANP32DO95626 131 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 COX7A1P24310 79 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 CDKN2CP42773 168 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 PRSS12P56730 875 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 RPL18Q07020 188 aaKnown RBP9.17□□□□□ -0.94
HDAC6-233ENST00000489352 ABCA11PQ4W5N1 156 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 LHFPL4Q7Z7J7 247 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 KRT73Q86Y46 540 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 MKXQ8IYA7 352 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 FAM185AQ8N0U4 392 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 OR1F12Q8NHA8 337 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 HDAC2Q92769 488 aaKnown RBP9.17□□□□□ -0.94
HDAC6-233ENST00000489352 MALSU1Q96EH3 234 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 MED30Q96HR3 178 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 OR52E6Q96RD3 313 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 SPATA5L1Q9BVQ7 753 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 EMC7Q9NPA0 242 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
HDAC6-233ENST00000489352 OR6C6A6NF89 314 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 RFXANKO14593 260 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 DBHP09172 617 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ASAH2BP0C7U1 165 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 OR12D2P58182 307 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ELF3P78545 371 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-233ENST00000489352 TOP3AQ13472 1001 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-233ENST00000489352 PCK2Q16822 640 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 C9orf152Q5JTZ5 239 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ARMC4Q5T2S8 1044 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 PGAP1Q75T13 922 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 CPLX4Q7Z7G2 160 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 DHDDSQ86SQ9 333 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF695Q8IW36 515 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 OSR2Q8N2R0 312 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 SPATA4Q8NEY3 305 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 LRRC29Q8WV35 223 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 RNFT2Q96EX2 444 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 CDRT15Q96T59 188 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ALG12Q9BV10 488 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 POLE4Q9NR33 117 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 C14orf119Q9NWQ9 140 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF391Q9UJN7 358 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 NDUFAF1Q9Y375 327 aa9.16□□□□□ -0.94
HDAC6-233ENST00000489352 ZSCAN12O43309 604 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 CHP2O43745 196 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 HCKP08631 526 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 AQP2P41181 271 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 NAA10P41227 235 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-233ENST00000489352 TGM4P49221 684 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 INSL3P51460 131 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 ERVFRD-1P60508 538 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 AQP6Q13520 282 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 PLBD1Q6P4A8 553 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF613Q6PF04 617 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 C18orf65Q6ZTR6 163 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 C16orf82Q7Z2V1 217 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 DYNAPQ8N1N2 210 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 OR5T2Q8NGG2 359 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 SLCO4A1Q96BD0 722 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 C12orf43Q96C57 262 aaKnown RBP9.15□□□□□ -0.94
HDAC6-233ENST00000489352 NMD3Q96D46 503 aaKnown RBP9.15□□□□□ -0.94
HDAC6-233ENST00000489352 PPP1R36Q96LQ0 422 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 BCL2L10Q9HD36 194 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 VNN3Q9NY84 501 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 LYVE1Q9Y5Y7 322 aa9.15□□□□□ -0.94
HDAC6-233ENST00000489352 IGLV1-36A0A0B4J1U3 117 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 PRR23D1E9PI22 279 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 POLR3GO15318 223 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 RHBDL1O75783 438 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 PTBP3O95758 552 aaKnown RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 ARG1P05089 322 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 SNRNP70P08621 437 aaKnown RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 PRR23D2P0DMB1 279 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 ETS2P15036 469 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 SLC34A1Q06495 639 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 GK2Q14410 553 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 DHRS4L2Q6PKH6 230 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 LINC00114Q6XXX2 140 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 FOXL2NBQ6ZUU3 175 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 MRPL21Q7Z2W9 205 aaKnown RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 ZNF329Q86UD4 541 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms