RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 BAIAP2L2Q6UXY1 529 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 C22orf34Q6ZV56 151 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 RGP1Q92546 391 aaPredicted RBP16.91■□□□□ 0.3
CCM2-216ENST00000488727 MAP6Q96JE9 813 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 INTS14Q96SY0 518 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 WACQ9BTA9 647 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 SYT4Q9H2B2 425 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 VSX1Q9NZR4 365 aaPredicted RBP16.91■□□□□ 0.3
CCM2-216ENST00000488727 RABL2AQ9UBK7 228 aaPredicted RBP16.91■□□□□ 0.3
CCM2-216ENST00000488727 RABL2BQ9UNT1 228 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 PIN1P1O15428 100 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 PAHP00439 452 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 KRT8P05787 483 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 OR8G3PP0DMU2 310 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ALOX5APP20292 161 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 INPP1P49441 399 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 BLVRAP53004 296 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 SORDQ00796 357 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ALKBH1Q13686 389 aaKnown RBP16.9■□□□□ 0.3
CCM2-216ENST00000488727 PLET1Q6UQ28 207 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 BHLHA15Q7RTS1 189 aaPredicted RBP16.9■□□□□ 0.3
CCM2-216ENST00000488727 RFT1Q96AA3 541 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 DERL3Q96Q80 235 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 MOV10Q9HCE1 1003 aaKnown RBP16.9■□□□□ 0.3
CCM2-216ENST00000488727 NOX4Q9NPH5 578 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ZNF221Q9UK13 617 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 SPATA2Q9UM82 520 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 PRR14LQ5THK1 2151 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 DHHO43323 396 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ZFPL1O95159 310 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 HLA-DMAP28067 261 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ARF1P84077 181 aaKnown RBP16.9■□□□□ 0.3
CCM2-216ENST00000488727 GABRA6Q16445 453 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 THEM4Q5T1C6 240 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 RSBN1Q5VWQ0 802 aaPredicted RBP16.9■□□□□ 0.3
CCM2-216ENST00000488727 LIPNQ5VXI9 398 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 YIPF7Q8N8F6 280 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ACBD4Q8NC06 268 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 OR5H6Q8NGV6 325 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 S100PBPQ96BU1 408 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ACTR6Q9GZN1 396 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 NELFAQ9H3P2 528 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 LAMP5Q9UJQ1 280 aa16.9■□□□□ 0.3
CCM2-216ENST00000488727 ARPC4-TTLL3A0A0A6YYG9 625 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 TRBV5-5A0A0J9YX44 114 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 CIB4A0PJX0 185 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 TVP23AA6NH52 213 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 CTLA4P16410 223 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 SRMP19623 302 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 IL32P24001 234 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 MAPK3P27361 379 aaPredicted RBP16.89■□□□□ 0.29
CCM2-216ENST00000488727 KCNJ8Q15842 424 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 ETFDHQ16134 617 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 C10orf128Q5T292 105 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 SLC25A47Q6Q0C1 308 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 OR1K1Q8NGR3 316 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 OR6N2Q8NGY6 317 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 NSMAFQ92636 917 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 RBP7Q96R05 134 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 B9D1Q9UPM9 204 aa16.89■□□□□ 0.29
CCM2-216ENST00000488727 A0A0B4J293 547 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 A0A1W2PPK0 400 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 UBL3O95164 117 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 FDX2Q6P4F2 183 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 STEAP2Q8NFT2 490 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 LINC01560Q8TB33 94 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 ST6GAL2Q96JF0 529 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 FOXB1Q99853 325 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 THAP7Q9BT49 309 aaPredicted RBP16.88■□□□□ 0.29
CCM2-216ENST00000488727 MRI1Q9BV20 369 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 HDHD2Q9H0R4 259 aa16.88■□□□□ 0.29
CCM2-216ENST00000488727 AK6Q9Y3D8 172 aaKnown RBP16.88■□□□□ 0.29
CCM2-216ENST00000488727 ANKHD1Q8IWZ3 2542 aaKnown RBP16.88■□□□□ 0.29
CCM2-216ENST00000488727 IGLV1-36A0A0B4J1U3 117 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 FAM240BA0A1B0GVZ2 78 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 PSMD9O00233 223 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 NR2C1P13056 603 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 SNRPBP14678 240 aaKnown RBP16.87■□□□□ 0.29
CCM2-216ENST00000488727 PITPNAQ00169 270 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 TGFBR3Q03167 851 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 STK11Q15831 433 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 Q499Y3 187 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 HIKESHIQ53FT3 197 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 UBE2NLQ5JXB2 153 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 ATAD3CQ5T2N8 411 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 ZNF57Q68EA5 555 aaPredicted RBP16.87■□□□□ 0.29
CCM2-216ENST00000488727 ZNF627Q7L945 461 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 DMRTC2Q8IXT2 367 aaPredicted RBP16.87■□□□□ 0.29
CCM2-216ENST00000488727 C1orf162Q8NEQ5 155 aaPredicted RBP16.87■□□□□ 0.29
CCM2-216ENST00000488727 OR5AK2Q8NH90 309 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 OTOSQ8NHW6 89 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 ASB17Q8WXJ9 295 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 SLC7A6Q92536 515 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 BCL2L2Q92843 193 aaPredicted RBP16.87■□□□□ 0.29
CCM2-216ENST00000488727 BOD1Q96IK1 185 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 WFIKKN1Q96NZ8 548 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 GFI1Q99684 422 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 MARVELD1Q9BSK0 173 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 FRRS1LQ9P0K9 344 aa16.87■□□□□ 0.29
CCM2-216ENST00000488727 A0A096LPE4 126 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms