RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TSPAN12O95859 305 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 KRT13P13646 458 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF44P15621 663 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 OTX2P32243 289 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 PEX19P40855 299 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZBTB6Q15916 424 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 SPECC1LQ69YQ0 1117 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 CASC1Q6TDU7 716 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF620Q6ZNG0 422 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 RFLNAQ6ZTI6 216 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 PEX26Q7Z412 305 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 RAB43Q86YS6 212 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 GRAMD2AQ8IUY3 354 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZDHHC21Q8IVQ6 265 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 C6orf223Q8N319 242 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 OR4D5Q8NGN0 318 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 RXFP2Q8WXD0 754 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF396Q96N95 335 aaPredicted RBP2.6□□□□□ -1.99
ITGB1-214ENST00000488427 TGM7Q96PF1 710 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 PKMYT1Q99640 499 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 TMEM246Q9BRR3 403 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 RIOK2Q9BVS4 552 aaKnown RBP2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ACTR6Q9GZN1 396 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 GBA3Q9H227 469 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 MEAF6Q9HAF1 191 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 DMAP1Q9NPF5 467 aaPredicted RBP2.6□□□□□ -1.99
ITGB1-214ENST00000488427 SLC35D1Q9NTN3 355 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 MED29Q9NX70 200 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 QPCTLQ9NXS2 382 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 BFARQ9NZS9 450 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 PCYOX1Q9UHG3 505 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF835Q9Y2P0 537 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
ITGB1-214ENST00000488427 DOCK4Q8N1I0 1966 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 WNK2Q9Y3S1 2297 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 LCE6AA0A183 80 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 LRP5LA4QPB2 252 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 H3BNH8 94 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PIRO00625 290 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 XKRYO14609 159 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 BET1O15155 118 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 SPAG6O75602 509 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 TNFSF13O75888 250 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 IFNB1P01574 187 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 STATHP02808 62 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 HNF1AP20823 631 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 MMP11P24347 488 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 ATP5C1P36542 298 aaKnown RBP2.59□□□□□ -1.99
ITGB1-214ENST00000488427 CSKP41240 450 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 ACAA2P42765 397 aaKnown RBP2.59□□□□□ -1.99
ITGB1-214ENST00000488427 UBE2AP49459 152 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 CCR6P51684 374 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 EFNB2P52799 333 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 RPS21P63220 83 aaKnown RBP2.59□□□□□ -1.99
ITGB1-214ENST00000488427 GPRC6AQ5T6X5 926 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PIP5KL1Q5T9C9 394 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 TTC23Q5W5X9 447 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 OR52W1Q6IF63 320 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PGAP1Q75T13 922 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 STRADAQ7RTN6 431 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PCP2Q8IVA1 136 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 TMEM61Q8N0U2 210 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PDCL2Q8N4E4 241 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 ACOT11Q8WXI4 607 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-214ENST00000488427 OR8D1Q8WZ84 308 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 OSTF1Q92882 214 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 ASB9Q96DX5 294 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 ITCHQ96J02 903 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 IP6K3Q96PC2 410 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 CCL19Q99731 98 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 REG4Q9BYZ8 158 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 TPK1Q9H3S4 243 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 CCL28Q9NRJ3 127 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 PIPOXQ9P0Z9 390 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 GNPTGQ9UJJ9 305 aa2.59□□□□□ -1.99
ITGB1-214ENST00000488427 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 SERPINE3A8MV23 424 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 PEX7O00628 323 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 UBFD1O14562 309 aaKnown RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 RGS16O15492 202 aaPredicted RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 HUS1O60921 280 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 MOSP00540 346 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 UGT2B4P06133 528 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 HEXBP07686 556 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZDHHC11BP0C7U3 371 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 DBTP11182 482 aaKnown RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 RPA2P15927 270 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZNF823P16415 610 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 UQCRC2P22695 453 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 CD70P32970 193 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 RGS4P49798 205 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZNF136P52737 540 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 SNTB2Q13425 540 aaKnown RBP2.58□□□□□ -2
ITGB1-214ENST00000488427 KIAA0087Q14695 138 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 BCL7AQ4VC05 210 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 CTRB2Q6GPI1 263 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 ZNF621Q6ZSS3 439 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 NLRP9Q7RTR0 991 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 DOLPP1Q86YN1 238 aa2.58□□□□□ -2
ITGB1-214ENST00000488427 SLC38A6Q8IZM9 456 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms