RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 PRB1P04280 392 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 SERPINE2P07093 398 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 ANXA5P08758 320 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 CD70P32970 193 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 BMI1P35226 326 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 NDUFA8P51970 172 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 GBX2P52951 348 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 TAS2R43P59537 309 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 TAS2R46P59540 309 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 BST1Q10588 318 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 SP6Q3SY56 376 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 LRRC23Q53EV4 343 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 PPM1LQ5SGD2 360 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 MORN3Q6PF18 240 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 FAM131AQ6UXB0 335 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 SPNS3Q6ZMD2 512 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 MBOAT2Q6ZWT7 520 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 ZCCHC7Q8N3Z6 543 aaKnown RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 CMTM2Q8TAZ6 248 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 NUBPLQ8TB37 319 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 RAB3IL1Q8TBN0 382 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 OR51E1Q8TCB6 317 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 KCNS1Q96KK3 526 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 ZNF442Q9H7R0 627 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 NLE1Q9NVX2 485 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 TAS2R5Q9NYW4 299 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 UXTQ9UBK9 157 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 FARSAQ9Y285 508 aaKnown RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 LRRC42Q9Y546 428 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 COMMD3-BMI1R4GMX3 469 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 COL11A1P12107 1806 aaPredicted RBP0.7□□□□□ -2.3
SENP6-210ENST00000487548 USP47Q96K76 1375 aa0.7□□□□□ -2.3
SENP6-210ENST00000487548 CACNA1DQ01668 2161 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 SYCE1LA8MT33 242 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 OVOL1O14753 267 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 PLXNB1O43157 2135 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 PALMO75781 387 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 GATBO75879 557 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 FLOT1O75955 427 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 AQP8O94778 261 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 ARL14EPLP0DKL9 152 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 HSPD1P10809 573 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 CTRB1P17538 263 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 NELFEP18615 380 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 IL32P24001 234 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 ACOT2P49753 483 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 RPL23AP62750 156 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 SEMG2Q02383 582 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 BIKQ13323 160 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 BTN1A1Q13410 526 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 AMMECR1LQ6DCA0 310 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 ZNF470Q6ECI4 717 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 APOBEC3HQ6NTF7 200 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 C12orf54Q6X4T0 127 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 RUFY3Q7L099 469 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 MDP1Q86V88 176 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 CBLN2Q8IUK8 224 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 CBR4Q8N4T8 237 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 LINC00469Q8N7U9 141 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 EIF1ADQ8N9N8 165 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 C19orf18Q8NEA5 215 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 SLC26A10Q8NG04 563 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 OR52N1Q8NH53 320 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 NRBF2Q96F24 287 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 SLIRPQ9GZT3 109 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 ILKAPQ9H0C8 392 aaPredicted RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 DUSP21Q9H596 190 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 ZNF302Q9NR11 478 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 HYPKQ9NX55 129 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 PISDQ9UG56 409 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 RWDD2AQ9UIY3 292 aa0.69□□□□□ -2.3
SENP6-210ENST00000487548 MCTS1Q9ULC4 181 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 ISY1Q9ULR0 285 aaKnown RBP0.69□□□□□ -2.3
SENP6-210ENST00000487548 IGHV3OR16-9A0A0B4J2B5 98 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 XKRY2A2RUG3 117 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 SMCO2A6NFE2 343 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 DNALI1O14645 258 aaPredicted RBP0.68□□□□□ -2.3
SENP6-210ENST00000487548 SCAMP2O15127 329 aaKnown RBP0.68□□□□□ -2.3
SENP6-210ENST00000487548 CLDN11O75508 207 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 MMP7P09237 267 aaPredicted RBP0.68□□□□□ -2.3
SENP6-210ENST00000487548 TNNI1P19237 187 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 PRKACBP22694 351 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 TGM4P49221 684 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 HNMTP50135 292 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 ACLYP53396 1101 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 EIF3EP60228 445 aaKnown RBP0.68□□□□□ -2.3
SENP6-210ENST00000487548 ILKQ13418 452 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 ART3Q13508 389 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 FHOD3Q2V2M9 1422 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 RNASEKQ6P5S7 137 aaKnown RBP0.68□□□□□ -2.3
SENP6-210ENST00000487548 TMEM107Q6UX40 140 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 RTL4Q6ZR62 310 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 CMTM1Q8IZ96 169 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 IQCKQ8N0W5 287 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 OR6Q1Q8NGQ2 317 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 MUC7Q8TAX7 377 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 NT5C3BQ969T7 300 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 IGF2BP2-AS1Q96M15 143 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 CSPG4P5Q96PW8 444 aa0.68□□□□□ -2.3
SENP6-210ENST00000487548 OR4K3Q96R72 315 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms