RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SNAI3Q3KNW1 292 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 PRR31Q5SQ13 230 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 ZNF362Q5T0B9 420 aaPredicted RBP10.16□□□□□ -0.78
VPS16-208ENST00000487461 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 DCDC5Q6ZRR9 648 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 NLRC3Q7RTR2 1065 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 FITM2Q8N6M3 262 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 CYB561A3Q8NBI2 242 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 OR11L1Q8NGX0 322 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 NSMCE2Q96MF7 247 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 FAM107BQ9H098 131 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 EGLN3Q9H6Z9 239 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 ZNF696Q9H7X3 374 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 CLN8Q9UBY8 286 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 KCNG2Q9UJ96 466 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 TMCC3Q9ULS5 477 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 TRRAPQ9Y4A5 3859 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 C22orf46C9J442 243 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 M0R135 149 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 BHLHE40O14503 412 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 TNFRSF13BO14836 293 aaPredicted RBP10.15□□□□□ -0.78
VPS16-208ENST00000487461 PSMB10P40306 273 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 HMGA2P52926 109 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 FGF12P61328 243 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 IL13RA1P78552 427 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 OR8G1Q15617 311 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 DEFB112Q30KQ8 113 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 SAMD4BQ5PRF9 694 aaKnown RBP10.15□□□□□ -0.78
VPS16-208ENST00000487461 SFRP4Q6FHJ7 346 aaPredicted RBP10.15□□□□□ -0.78
VPS16-208ENST00000487461 C16orf87Q6PH81 154 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 BRD3OSQ6XYD6 125 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 MRPL21Q7Z2W9 205 aaKnown RBP10.15□□□□□ -0.78
VPS16-208ENST00000487461 ZDHHC21Q8IVQ6 265 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 PGAM4Q8N0Y7 254 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 OR51L1Q8NGJ5 315 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 OR2AE1Q8NHA4 323 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 SPTSSAQ969W0 71 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 ZNF799Q96GE5 643 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 NSRP1Q9H0G5 558 aaKnown RBP10.15□□□□□ -0.78
VPS16-208ENST00000487461 PRDM13Q9H4Q3 707 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 ARL8BQ9NVJ2 186 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 RNF7Q9UBF6 113 aa10.15□□□□□ -0.78
VPS16-208ENST00000487461 GGT3PA6NGU5 568 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 POM121CA8CG34 1229 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 PHYHO14832 338 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 HOXA3O43365 443 aaPredicted RBP10.14□□□□□ -0.79
VPS16-208ENST00000487461 KCNAB3O43448 404 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 PTBP3O95758 552 aaKnown RBP10.14□□□□□ -0.79
VPS16-208ENST00000487461 GASTP01350 101 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
VPS16-208ENST00000487461 GLYATL3Q5SZD4 288 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 BOLLQ8N9W6 283 aaKnown RBP10.14□□□□□ -0.79
VPS16-208ENST00000487461 SLC37A3Q8NCC5 494 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 PROKR2Q8NFJ6 384 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 OR9Q2Q8NGE9 314 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 BTBD10Q9BSF8 475 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 SLC22A4Q9H015 551 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 FN3KRPQ9HA64 309 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 IL20Q9NYY1 176 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 LYVE1Q9Y5Y7 322 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 CDH10Q9Y6N8 788 aa10.14□□□□□ -0.79
VPS16-208ENST00000487461 LGALS8O00214 317 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 TNFRSF11BO00300 401 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 GMDSO60547 372 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 KRT36O76013 467 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 MDKP21741 143 aaPredicted RBP10.13□□□□□ -0.79
VPS16-208ENST00000487461 OMGP23515 440 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 PRKXP51817 358 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZSCAN26Q16670 478 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZNF770Q6IQ21 691 aaPredicted RBP10.13□□□□□ -0.79
VPS16-208ENST00000487461 DRAM2Q6UX65 266 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZNF826PQ6ZT77 177 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 DCXRQ7Z4W1 244 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 DEFB107AQ8IZN7 70 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZNF511Q8NB15 262 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 OR52L1Q8NGH7 329 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 OR4C15Q8NGM1 316 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 OR8D4Q8NGM9 314 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 OR9Q1Q8NGQ5 310 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 OR2T4Q8NH00 348 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZDHHC16Q969W1 377 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 TMIGD2Q96BF3 282 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 TRIM15Q9C019 465 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 CENPMQ9NSP4 180 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 C1orf123Q9NWV4 160 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 MRPL15Q9P015 296 aaKnown RBP10.13□□□□□ -0.79
VPS16-208ENST00000487461 ERVK-18Q9QC07 812 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 TAGLN3Q9UI15 199 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 N6AMT1Q9Y5N5 214 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 PKD1L1Q8TDX9 2849 aa10.13□□□□□ -0.79
VPS16-208ENST00000487461 ZNF879B4DU55 563 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 C3orf80F5H4A9 247 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 ZNF593O00488 134 aaPredicted RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 ENSAO43768 121 aaKnown RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 FCN3O75636 299 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 GYPBP06028 91 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms