RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 SMARCD3Q6STE5 483 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 ZNF826PQ6ZT77 177 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 PGAP1Q75T13 922 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 FGFRL1Q8N441 504 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 OR4K13Q8NH42 304 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 SPRYD4Q8WW59 207 aaPredicted RBP13.38□□□□□ -0.27
SRRT-212ENST00000487311 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 LHX4Q969G2 390 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 MAP6Q96JE9 813 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 ATF6BQ99941 703 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 NDEL1Q9GZM8 345 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 FN3KQ9H479 309 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 MRPL22Q9NWU5 206 aaKnown RBP13.38□□□□□ -0.27
SRRT-212ENST00000487311 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 POMT1Q9Y6A1 747 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
SRRT-212ENST00000487311 A0A0U1RQK1 487 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 OR6C68A6NDL8 312 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 CD300LBA8K4G0 201 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 ADAM20O43506 726 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 GPR137BO60478 399 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 CLPXO76031 633 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PTBP3O95758 552 aaKnown RBP13.37□□□□□ -0.27
SRRT-212ENST00000487311 GYPAP02724 150 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 LIPFP07098 398 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PSKH1P11801 424 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 RHCEP18577 417 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 RPS27P42677 84 aaKnown RBP13.37□□□□□ -0.27
SRRT-212ENST00000487311 IER3P46695 156 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PROK1P58294 105 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 ELF3P78545 371 aaPredicted RBP13.37□□□□□ -0.27
SRRT-212ENST00000487311 ZNF92Q03936 586 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 OR8G1Q15617 311 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 RFX4Q33E94 735 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 ZBTB46Q86UZ6 589 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 FAM86B1Q8N7N1 296 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 SSMEM1Q8WWF3 244 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 DYRK2Q92630 601 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 PKP2Q99959 881 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 FN3KRPQ9HA64 309 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 RPRD1BQ9NQG5 326 aaKnown RBP13.37□□□□□ -0.27
SRRT-212ENST00000487311 MRGBPQ9NV56 204 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 AURKCQ9UQB9 309 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
SRRT-212ENST00000487311 M0QZ24 198 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 TIMM23O14925 209 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 SASH3O75995 380 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 COX4I1P13073 169 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 MALLQ13021 153 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 OR8B8Q15620 311 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 TAF9Q16594 264 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 DNM1P34Q6PK57 102 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 HDXQ7Z353 690 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 OR2AJ1Q8NGZ0 328 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 OR2AE1Q8NHA4 323 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 RP9Q8TA86 221 aaKnown RBP13.36□□□□□ -0.27
SRRT-212ENST00000487311 TBC1D15Q8TC07 691 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 FAM162AQ96A26 154 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 DHRS1Q96LJ7 313 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 OR52D1Q9H346 318 aa13.36□□□□□ -0.27
SRRT-212ENST00000487311 IGHV3OR15-7A0A075B7D8 119 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 A0A1B0GW55 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 OOEPA6NGQ2 149 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 ARPC3O15145 178 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 OR10H3O60404 316 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 TSPAN15O95858 294 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 LHBP01229 141 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 GRPP07492 148 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L2P0CJ85 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L3P0CJ86 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L4P0CJ87 422 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L5P0CJ88 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L6P0CJ89 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L7P0CJ90 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 PRB3Q04118 309 aaPredicted RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 ECH1Q13011 328 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4L9Q6RFH8 374 aaPredicted RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 Q6ZSV7 163 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 MRPL21Q7Z2W9 205 aaKnown RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 FAM90A1Q86YD7 464 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 GCSAMQ8N6F7 178 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 PNLDC1Q8NA58 520 aaKnown RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 HOPXQ9BPY8 73 aaPredicted RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 TRIM15Q9C019 465 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 C1orf123Q9NWV4 160 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 DUX4Q9UBX2 424 aa13.35□□□□□ -0.27
SRRT-212ENST00000487311 FAM32AQ9Y421 112 aaKnown RBP13.35□□□□□ -0.27
SRRT-212ENST00000487311 TRAV38-1A0A0B4J264 116 aa13.34□□□□□ -0.27
SRRT-212ENST00000487311 M0R135 149 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms