RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RPS26P11Q5JNZ5 115 aaPredicted RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 SYT6Q5T7P8 510 aaPredicted RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 MBNL2Q5VZF2 373 aaKnown RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 TYW3Q6IPR3 259 aaKnown RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 SLC27A4Q6P1M0 643 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 TNFAIP8L2Q6P589 184 aaPredicted RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 SLC16A12Q6ZSM3 486 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 PRSS48Q7RTY5 328 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 ANKRD13BQ86YJ7 626 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 SKA3Q8IX90 412 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 RHOXF1Q8NHV9 184 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 BBS10Q8TAM1 723 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 CNOT9Q92600 299 aaKnown RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 ZNF607Q96SK3 696 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 FOXB1Q99853 325 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 OR51I1Q9H343 314 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 RLIMQ9NVW2 624 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 ENOPH1Q9UHY7 261 aa9.6□□□□□ -0.87
TRIM56-204ENST00000487252 FAM32AQ9Y421 112 aaKnown RBP9.6□□□□□ -0.87
TRIM56-204ENST00000487252 DUXAA6NLW8 204 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 A8MVM7 634 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 TMEM178BH3BS89 294 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 J3KTA2 159 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 RGS10O43665 173 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 ENSAO43768 121 aaKnown RBP9.59□□□□□ -0.87
TRIM56-204ENST00000487252 NOL3O60936 208 aaKnown RBP9.59□□□□□ -0.87
TRIM56-204ENST00000487252 TOX4O94842 621 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 GADD45GO95257 159 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 MT-ND2P03891 347 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 OR12D1P0DN82 309 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 CD28P10747 220 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 SMIM11AP58511 58 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 TNFAIP6P98066 277 aaPredicted RBP9.59□□□□□ -0.87
TRIM56-204ENST00000487252 C1orf140Q5VVS0 124 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 ZNF841Q6ZN19 808 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 SMYD1Q8NB12 490 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 OR1J1Q8NGS3 322 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 MFSD8Q8NHS3 518 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 YIPF6Q96EC8 236 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 NIPSNAP1Q9BPW8 284 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 FUNDC2Q9BWH2 189 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 PPA2Q9H2U2 334 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 C1orf198Q9H425 327 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 CDH20Q9HBT6 801 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 P2RX2Q9UBL9 471 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 PSORS1C1Q9UIG5 152 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 ENPP5Q9UJA9 477 aa9.59□□□□□ -0.87
TRIM56-204ENST00000487252 A0A0G2JPF8 293 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 TMEM247A6NEH6 219 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 ZAR1LA6NP61 321 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 HNRNPCL2B2RXH8 293 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 HNRNPCL3B7ZW38 293 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 PTGES3LE9PB15 166 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 PHYHO14832 338 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 ANGPTL7O43827 346 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 FAM20BO75063 409 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 SERPINB7O75635 380 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 INMTO95050 263 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 GABARAPO95166 117 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 LHBP01229 141 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 HNRNPCL4P0DMR1 293 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 CXCR1P25024 350 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 LMO1P25800 156 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
TRIM56-204ENST00000487252 HPCAP84074 193 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 FUT5Q11128 374 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 GNA13Q14344 377 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 SYPL1Q16563 259 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 TBC1D28Q2M2D7 210 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 ZNF718Q3SXZ3 478 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 ZBTB37Q5TC79 503 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 UBE2UQ5VVX9 321 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 WDR25Q64LD2 544 aaPredicted RBP9.58□□□□□ -0.88
TRIM56-204ENST00000487252 NHLRC1Q6VVB1 395 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 WDFY2Q96P53 400 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 CITED2Q99967 270 aaPredicted RBP9.58□□□□□ -0.88
TRIM56-204ENST00000487252 TMEM246Q9BRR3 403 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 PTDSS2Q9BVG9 487 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 SPATA5L1Q9BVQ7 753 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 RANBP3Q9H6Z4 567 aaPredicted RBP9.58□□□□□ -0.88
TRIM56-204ENST00000487252 NMNAT1Q9HAN9 279 aaPredicted RBP9.58□□□□□ -0.88
TRIM56-204ENST00000487252 POLE3Q9NRF9 147 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 AASSQ9UDR5 926 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 SH3GLB1Q9Y371 365 aa9.58□□□□□ -0.88
TRIM56-204ENST00000487252 MEGF11A6BM72 1044 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 BTBD17A6NE02 478 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 LIPFP07098 398 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 VSIG10L2P0DP72 767 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 TNFRSF1AP19438 455 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 PITPNBP48739 271 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 CRISP1P54107 249 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 CRISP3P54108 245 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 AQP6Q13520 282 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 IRF3Q14653 427 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 CTF1Q16619 201 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 SMN1Q16637 294 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms