RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 RAC2P15153 192 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 SELEP16581 610 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 SLC2A5P22732 501 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 FASP25445 335 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 OTX1P32242 354 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 POLR2IP36954 125 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 NAA10P41227 235 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CRYBB2P43320 205 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 GPR6P46095 362 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 SLC6A9P48067 706 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 RGS6P49758 472 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PRKXP51817 358 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CRISP1P54107 249 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 ACTR3P61158 418 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 MRPS11P82912 194 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 TNFAIP6P98066 277 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PPP2R2BQ00005 443 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 MVKQ03426 396 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 ECH1Q13011 328 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 EIF2B1Q14232 305 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 GK2Q14410 553 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PTGES3Q15185 160 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PCGF3Q3KNV8 242 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 KLHL12Q53G59 568 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 KDM4DQ6B0I6 523 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 IL17RELQ6ZVW7 336 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 DPY19L4Q7Z388 723 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 BCDIN3DQ7Z5W3 292 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 TIGD4Q8IY51 512 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 C1orf174Q8IYL3 243 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PARP8Q8N3A8 854 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 OR2Z1Q8NG97 314 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 OR2AE1Q8NHA4 323 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CLDND2Q8NHS1 167 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 SLAMF6Q96DU3 332 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 ELMOD3Q96FG2 381 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF799Q96GE5 643 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 DCLRE1CQ96SD1 692 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 INTS14Q96SY0 518 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CIB1Q99828 191 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 PKP2Q99959 881 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 COPS4Q9BT78 406 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 ABHD6Q9BV23 337 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 GABARAPL1Q9H0R8 117 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 MARCH7Q9H992 704 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 KRT84Q9NSB2 600 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CENPMQ9NSP4 180 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 DECR2Q9NUI1 292 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 TVP23BQ9NYZ1 205 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 OAZ3Q9UMX2 235 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 DOCK11Q5JSL3 2073 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
UBE4B-209ENST00000487244 SVEP1Q4LDE5 3571 aa6.06□□□□□ -1.44
UBE4B-209ENST00000487244 CUBNO60494 3623 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ANK3Q12955 4377 aaKnown RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 A8MV72 311 aaPredicted RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 PRR32B1ATL7 298 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 FAM157AC9JC47 383 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF878C9JN71 531 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 TLX2O43763 284 aaPredicted RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CRLF1O75462 422 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 HLA-DPB1P04440 258 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 HMGN1P05114 100 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CD55P08174 381 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 MRPL3P09001 348 aaKnown RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 PAICSP22234 425 aaKnown RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 IGFBP5P24593 272 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CX3CR1P49238 355 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CHN2P52757 468 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 HCCSP53701 268 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 TPTEP56180 551 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 LMO4P61968 165 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF92Q03936 586 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 APOFQ13790 326 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 MOGQ16653 247 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 TEX30Q5JUR7 227 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 FAM209AQ5JX71 171 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 GLYATL3Q5SZD4 288 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ZBTB37Q5TC79 503 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 C12orf73Q69YU5 71 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CYB5R2Q6BCY4 276 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CXXC5Q7LFL8 322 aaKnown RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 HIPK1Q86Z02 1210 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 RFLNBQ8N5W9 214 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF540Q8NDQ6 660 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 OR8G5Q8NG78 346 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 OR5L1Q8NGL2 311 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 RNF133Q8WVZ7 376 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 ITLN1Q8WWA0 313 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 DNAJC9Q8WXX5 260 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CCL17Q92583 94 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 DVL3Q92997 716 aaPredicted RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 SPTSSAQ969W0 71 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CENPNQ96H22 339 aaPredicted RBP6.05□□□□□ -1.44
UBE4B-209ENST00000487244 PLEKHA8Q96JA3 519 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 TTTY10Q9BZA0 68 aa6.05□□□□□ -1.44
UBE4B-209ENST00000487244 CYSLTR2Q9NS75 346 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms