RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 YIF1AO95070 293 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 LRATO95237 230 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 CLDN7O95471 211 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC16A8O95907 504 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 FABP3P05413 133 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ADRA2AP08913 450 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 CST2P09228 141 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SELEP16581 610 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 KITLGP21583 273 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 F2RP25116 425 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 HOXC9P31274 260 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SOAT1P35610 550 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DLSTP36957 453 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 PIGAP37287 484 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC6A8P48029 635 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 NPBWR1P48145 328 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 PGGT1BP53609 377 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC35A2P78381 396 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 NAAAQ02083 359 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 AIMP2Q13155 320 aaKnown RBP4.78□□□□□ -1.64
COPS3-209ENST00000486810 CRMP1Q14194 572 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 CLINT1Q14677 625 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ZNF284Q2VY69 593 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 XKR7Q5GH72 579 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DCAF12L2Q5VW00 463 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 TMEM225Q6GV28 225 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC8B1Q6J4K2 584 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DNAJC24Q6P3W2 148 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 GJB7Q6PEY0 223 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 NHLRC1Q6VVB1 395 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 HACD2Q6Y1H2 254 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 Q6ZSV7 163 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 TMPPEQ6ZT21 453 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 Q6ZTK2 550 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 CHST9Q7L1S5 443 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SLC16A9Q7RTY1 509 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 FTMTQ8N4E7 242 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ZCCHC9Q8N567 271 aaKnown RBP4.78□□□□□ -1.64
COPS3-209ENST00000486810 KCNG3Q8TAE7 436 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 PIGTQ969N2 578 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 GALNT14Q96FL9 552 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 PYURFQ96I23 114 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 IL17FQ96PD4 163 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ARHGDIGQ99819 225 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 SOSTQ9BQB4 213 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 FAAP24Q9BTP7 215 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 OR8D2Q9GZM6 311 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 OR51J1Q9H342 316 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DPAGT1Q9H3H5 408 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 C1orf198Q9H425 327 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ANKRA2Q9H9E1 313 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ZBTB20Q9HC78 741 aaPredicted RBP4.78□□□□□ -1.64
COPS3-209ENST00000486810 RAB18Q9NP72 206 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 ACOT13Q9NPJ3 140 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 TMEM38BQ9NVV0 291 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 DOK5Q9P104 306 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 IKZF2Q9UKS7 526 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 B3GALT5Q9Y2C3 310 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 TSSC4Q9Y5U2 329 aaPredicted RBP4.78□□□□□ -1.64
COPS3-209ENST00000486810 LAMA4Q16363 1823 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 COL1A2P08123 1366 aa4.78□□□□□ -1.64
COPS3-209ENST00000486810 CCDC88AQ3V6T2 1871 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 KIAA0556O60303 1618 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.77□□□□□ -1.65
COPS3-209ENST00000486810 IGHV2OR16-5A0A0B4J2B6 119 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 A0A0G2JN53 185 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.77□□□□□ -1.65
COPS3-209ENST00000486810 C17orf102A2RUQ5 167 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 TVP23AA6NH52 213 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A8PA6NJQ4 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A7PA6NKC0 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A22PA8MWA6 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A12PA8MX19 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A23PA8MXZ1 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 C17orf105B2RV13 164 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 G3V3Q6 166 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 SLC17A3O00476 420 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 CASKO14936 926 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 LYRM1O43325 122 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 PDE6DO43924 150 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 UPK3AO75631 287 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 RGS11O94810 467 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 ZNF432O94892 652 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 ACTL6AO96019 429 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 MT-ND4P03905 459 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 SERPIND1P05546 499 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A13PP0C7W8 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 FAM90A24PP0C7X0 464 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 UBBP0CG47 229 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 C8orf89P0DMQ9 161 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 HSD17B1P14061 328 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 CEBPBP17676 345 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 IL1RNP18510 177 aa4.77□□□□□ -1.65
COPS3-209ENST00000486810 PSMA1P25786 263 aaKnown RBP4.77□□□□□ -1.65
COPS3-209ENST00000486810 GABRR2P28476 465 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms