RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 PRKACAP17612 351 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 SERPINB8P50452 374 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 PSMD4P55036 377 aaKnown RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 AP1S2P56377 157 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 YWHAEP62258 255 aaKnown RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 GABRA6Q16445 453 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 HSP90AA4PQ58FG1 418 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 H3F3CQ6NXT2 135 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 Q6ZR03 302 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 NTM-AS1Q6ZSK4 140 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 CDKL3Q8IVW4 592 aaPredicted RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 WDFY1Q8IWB7 410 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 OR4K5Q8NGD3 323 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 NAT6Q93015 286 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 ISOC2Q96AB3 205 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RCN3Q96D15 328 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RNF157Q96PX1 679 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 CYP3A43Q9HB55 503 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 CD209Q9NNX6 404 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RGS18Q9NS28 235 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 ADA2Q9NZK5 511 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RHBDD3Q9Y3P4 386 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 MROH7Q68CQ1 1323 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 TRAV6A0A075B6T7 132 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 A0A0U1RQV1 116 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF705GA8MUZ8 300 aaPredicted RBP2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZBTB5O15062 677 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 CHMP2AO43633 222 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 REM1O75628 298 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 SCELO95171 688 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 C1GALT1C1LP0DN25 315 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 GFAPP14136 432 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 PMCHP20382 165 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 NPY1RP25929 384 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 HTR1DP28221 377 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 PPICP45877 212 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 SLC11A1P49279 550 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
SMC4-218ENST00000486711 CDK5Q00535 292 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 RBMY1FQ15415 496 aaKnown RBP2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF829Q3KNS6 432 aaPredicted RBP2.77□□□□□ -1.97
SMC4-218ENST00000486711 MPV17L2Q567V2 206 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 C5orf47Q569G3 176 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 GCSAMLQ5JQS6 135 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF684Q5T5D7 378 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 MLIPQ5VWP3 458 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 TMEM205Q6UW68 189 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 WDR86Q86TI4 376 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF695Q8IW36 515 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 LGI3Q8N145 548 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 TRAM1L1Q8N609 369 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF321PQ8N8H1 164 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 GPR26Q8NDV2 337 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 RBMXL1Q96E39 390 aaKnown RBP2.77□□□□□ -1.97
SMC4-218ENST00000486711 SGTBQ96EQ0 304 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ZNF488Q96MN9 340 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 UQCC2Q9BRT2 126 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 FANCEQ9HB96 536 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 NECAP2Q9NVZ3 263 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 SLC17A7Q9P2U7 560 aa2.77□□□□□ -1.97
SMC4-218ENST00000486711 ADGRA3Q8IWK6 1321 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 IGSF9BQ9UPX0 1349 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 GABRR3A8MPY1 467 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 CENPXA8MT69 81 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 ERI3O43414 337 aaKnown RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 NMT2O60551 498 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 SLC16A7O60669 478 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 HLA-DQA1P01909 254 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 OR8U9P0C7N5 309 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 PGA4P0DJD7 388 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 PGA3P0DJD8 388 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 GABRR2P28476 465 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 CRADDP78560 199 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 KDSRQ06136 332 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 SLC39A6Q13433 755 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 EIF4EBP1Q13541 118 aaPredicted RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 TPRG1LQ5T0D9 272 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 AP1ARQ63HQ0 302 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 BHLHA15Q7RTS1 189 aaPredicted RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 MRPL21Q7Z2W9 205 aaKnown RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 LINC00523Q86TU6 105 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 H1FOOQ8IZA3 346 aaPredicted RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 ARRDC1Q8N5I2 433 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 TMEM104Q8NE00 496 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 LILRB4Q8NHJ6 448 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 KIAA1143Q96AT1 154 aaPredicted RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 OR52D1Q9H346 318 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 C1orf198Q9H425 327 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 RRAGDQ9NQL2 400 aaPredicted RBP2.76□□□□□ -1.97
SMC4-218ENST00000486711 IFNKQ9P0W0 207 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 ENOPH1Q9UHY7 261 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 HES2Q9Y543 173 aa2.76□□□□□ -1.97
SMC4-218ENST00000486711 DENND4AQ7Z401 1863 aa2.75□□□□□ -1.97
SMC4-218ENST00000486711 PCDH11XQ9BZA7 1347 aa2.75□□□□□ -1.97
SMC4-218ENST00000486711 TET2Q6N021 2002 aaPredicted RBP2.75□□□□□ -1.97
SMC4-218ENST00000486711 IGKV1-8A0A0C4DH67 115 aa2.75□□□□□ -1.97
SMC4-218ENST00000486711 GOLGA8JA6NMD2 632 aa2.75□□□□□ -1.97
SMC4-218ENST00000486711 RAD1O60671 282 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms