RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 EIF3HO15372 352 aaKnown RBP eCLIP2.09□□□□□ -2.07
LTN1-206ENST00000486427 ERLIN1O75477 346 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 KRT14P02533 472 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 ARG1P05089 322 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 NTF3P20783 257 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 SP4Q02446 784 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 DGCR6Q14129 220 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 ALKBH6Q3KRA9 238 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 HSDL1Q3SXM5 330 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 HCP5Q6MZN7 132 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 SCD5Q86SK9 330 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 NUBPLQ8TB37 319 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 CPNE4Q96A23 557 aaPredicted RBP2.09□□□□□ -2.07
LTN1-206ENST00000486427 TM2D3Q9BRN9 247 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 C20orf24Q9BUV8 137 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 NEK6Q9HC98 313 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 SLC17A4Q9Y2C5 497 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 H7C1H1 209 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 PLIN3O60664 434 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 AGTP01019 485 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 CRISP1P54107 249 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 DMC1Q14565 340 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 ZNF266Q14584 549 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 MAD2L1BPQ15013 274 aaPredicted RBP2.08□□□□□ -2.08
LTN1-206ENST00000486427 NCF4Q15080 339 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 HSP90AB3PQ58FF7 597 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 CMC1Q7Z7K0 106 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 OR1J4Q8NGS1 313 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 APH1BQ8WW43 257 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 CAPSLQ8WWF8 208 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 HGDQ93099 445 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 CHP1Q99653 195 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 TMEM185BQ9H7F4 350 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 MED4Q9NPJ6 270 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 SLC17A7Q9P2U7 560 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 RABL2BQ9UNT1 228 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 NINLQ9Y2I6 1382 aa2.08□□□□□ -2.08
LTN1-206ENST00000486427 TSPOAP1O95153 1857 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 TRIM64CA6NLI5 447 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 CDC40O60508 579 aaKnown RBP eCLIP2.07□□□□□ -2.08
LTN1-206ENST00000486427 FLOT1O75955 427 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 MYL2P10916 166 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 POLR2IP36954 125 aaKnown RBP2.07□□□□□ -2.08
LTN1-206ENST00000486427 IDH2P48735 452 aaKnown RBP2.07□□□□□ -2.08
LTN1-206ENST00000486427 CMC4P56277 68 aaPredicted RBP2.07□□□□□ -2.08
LTN1-206ENST00000486427 C21orf59P57076 290 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 EIF3EP60228 445 aaKnown RBP2.07□□□□□ -2.08
LTN1-206ENST00000486427 BEX3Q00994 111 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 SEMG2Q02383 582 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 LIPEQ05469 1076 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 PPIDQ08752 370 aaKnown RBP2.07□□□□□ -2.08
LTN1-206ENST00000486427 TRAM2Q15035 370 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 C1orf185Q5T7R7 199 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 FAM71AQ8IYT1 594 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 STK40Q8N2I9 435 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 BBS5Q8N3I7 341 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 OR10G6Q8NH81 332 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 LYPD6BQ8NI32 183 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 RNF145Q96MT1 663 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 TMEM243Q9BU79 118 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 ZNF160Q9HCG1 818 aa2.07□□□□□ -2.08
LTN1-206ENST00000486427 ZSWIM8A7E2V4 1837 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 ITGB4P16144 1822 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 MYO16Q9Y6X6 1858 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 CTAGE15A4D2H0 777 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 MANBAO00462 879 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 RAD51CO43502 376 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 HUS1O60921 280 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 BCKDHBP21953 392 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 OR1E1P30953 314 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 MRPL19P49406 292 aaKnown RBP2.06□□□□□ -2.08
LTN1-206ENST00000486427 RGS8P57771 180 aaPredicted RBP2.06□□□□□ -2.08
LTN1-206ENST00000486427 RPS15P62841 145 aaKnown RBP2.06□□□□□ -2.08
LTN1-206ENST00000486427 PNOCQ13519 176 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 MED27Q6P2C8 311 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 TTC23LQ6PF05 361 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 TMEM220Q6QAJ8 160 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 C12orf54Q6X4T0 127 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 CTAGE6Q86UF2 777 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 CBLN2Q8IUK8 224 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 OR5K2Q8NHB8 316 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 NRGNQ92686 78 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 C8orf44Q96CB5 159 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 PANX1Q96RD7 426 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 FAM192AQ9GZU8 254 aa2.06□□□□□ -2.08
LTN1-206ENST00000486427 A0A1B0GUH1 482 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 A6NDN8 102 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 PDZK1P1A8MUH7 402 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 ZNF878C9JN71 531 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 TNFRSF11BO00300 401 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 MFNGO00587 321 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 DNALI1O14645 258 aaPredicted RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 LSM1O15116 133 aaKnown RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 SERPINB7O75635 380 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 KLHL2O95198 593 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 ASGR1P07306 291 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 GTF2E2P29084 291 aaKnown RBP2.05□□□□□ -2.08
LTN1-206ENST00000486427 TALDO1P37837 337 aa2.05□□□□□ -2.08
LTN1-206ENST00000486427 PSMD5Q16401 504 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms