RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SYS1Q8N2H4 156 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 SPSB4Q96A44 273 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 HAVCR1Q96D42 359 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 CMBLQ96DG6 245 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 PGAM5Q96HS1 289 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 OR10A2Q9H208 303 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 OPA3Q9H6K4 179 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 N6AMT1Q9Y5N5 214 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 R4GMQ9 66 aa17.06■□□□□ 0.32
COL6A2-208ENST00000485591 LOC110117498-PIK3R3F6TDL0 507 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 M0R233 179 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 PNPP00491 289 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 TACSTD2P09758 323 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 LIMS3P0CW19 117 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 LIMS4P0CW20 117 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 PPOXP50336 477 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF92Q03936 586 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 MFGE8Q08431 387 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ST3GAL4Q11206 333 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 PSG7Q13046 419 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 HLXQ14774 488 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 MOGQ16653 247 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 MRPL21Q7Z2W9 205 aaKnown RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF540Q8NDQ6 660 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 OR8B12Q8NGG6 310 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 OR2AE1Q8NHA4 323 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 MBD6Q96DN6 1003 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 CACNG6Q9BXT2 260 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 RGCCQ9H4X1 137 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 SCN3BQ9NY72 215 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 TAAR3PQ9P1P4 343 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF319Q9P2F9 582 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 CGGBP1Q9UFW8 167 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 NUFIP1Q9UHK0 495 aaKnown RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 GPR160Q9UJ42 338 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 PURGQ9UJV8 347 aaKnown RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
COL6A2-208ENST00000485591 PCDHGB5Q9Y5G0 923 aa17.05■□□□□ 0.32
COL6A2-208ENST00000485591 ANKRD17O75179 2603 aaKnown RBP17.04■□□□□ 0.32
COL6A2-208ENST00000485591 H7C417 338 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 RPP14O95059 124 aaKnown RBP17.04■□□□□ 0.32
COL6A2-208ENST00000485591 MYL12AP19105 171 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 ETV1P50549 477 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 OR12D2P58182 307 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 MED21Q13503 144 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 TIGD6Q17RP2 521 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 PGAP1Q75T13 922 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 STX19Q8N4C7 294 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 RORBQ92753 470 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 SGK3Q96BR1 496 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 C4orf36Q96KX1 117 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 SIGLEC11Q96RL6 698 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 REPIN1Q9BWE0 567 aaKnown RBP17.04■□□□□ 0.32
COL6A2-208ENST00000485591 PBOV1Q9GZY1 135 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 DYNLRB1Q9NP97 96 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 G6PC2Q9NQR9 355 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 BEX4Q9NWD9 120 aaPredicted RBP17.04■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF391Q9UJN7 358 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 TPRKBQ9Y3C4 175 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 SNX5Q9Y5X3 404 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 PMF1-BGLAPU3KQ54 211 aa17.04■□□□□ 0.32
COL6A2-208ENST00000485591 PAX1P15863 534 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 SELEP16581 610 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 CFL1P23528 166 aaKnown RBP17.03■□□□□ 0.32
COL6A2-208ENST00000485591 CDKN1AP38936 164 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 SLC35A2P78381 396 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 MVKQ03426 396 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 NKPD1Q17RQ9 610 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 DEFB113Q30KQ7 82 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 REEP6Q96HR9 211 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF701Q9NV72 531 aaPredicted RBP17.03■□□□□ 0.32
COL6A2-208ENST00000485591 UBAP1Q9NZ09 502 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 LRBAP50851 2863 aa17.03■□□□□ 0.32
COL6A2-208ENST00000485591 SPG11Q96JI7 2443 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 A0A0U1RQV5 110 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 IQCF6A8MYZ5 107 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 J3QLW9 94 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 TIMM8AO60220 97 aaPredicted RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CDK1P06493 297 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF19P17023 458 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CRHBPP24387 322 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 LIPAP38571 399 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ALDH3B1P43353 468 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 MMP15P51511 669 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 MRPL28Q13084 256 aaKnown RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ALKBH6Q3KRA9 238 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 RBM48Q5RL73 367 aaKnown RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 BCL2L15Q5TBC7 163 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CATSPERDQ86XM0 798 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ELMOD2Q8IZ81 293 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ZNF786Q8N393 782 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 MYDGFQ969H8 173 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 RNF166Q96A37 237 aaPredicted RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 PELI1Q96FA3 418 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 MS4A5Q9H3V2 200 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 DUSP21Q9H596 190 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ISG20L2Q9H9L3 353 aaKnown RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CYSLTR2Q9NS75 346 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms