RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-210	ENST00000485247	PHB	P35232	272 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	VDAC2	P45880	294 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	RGS6	P49758	472 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	SERPINB9	P50453	376 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	UBE2E1	P51965	193 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	BLCAP	P62952	87 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ACSM1	Q08AH1	577 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	CNN3	Q15417	329 aa	Known RBP	4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	MPPED2	Q15777	294 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	KCNJ8	Q15842	424 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	SGCA	Q16586	387 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ALG10B	Q5I7T1	473 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PRAMEF6	Q5VXH4	476 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR2T2	Q6IF00	324 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	C5orf46	Q6UWT4	87 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	RIMKLA	Q8IXN7	391 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	LRRC34	Q8IZ02	419 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	C10orf111	Q8N326	155 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247		Q8N7P7	452 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	NPEPL1	Q8NDH3	523 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	BHLHE23	Q8NDY6	225 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR8G5	Q8NG78	346 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR11L1	Q8NGX0	322 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PIFO	Q8TCI5	191 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	TNFRSF14	Q92956	283 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PTP4A1	Q93096	173 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF582	Q96NG8	517 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ERP44	Q9BS26	406 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF649	Q9BS31	505 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	SLC35A5	Q9BS91	424 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR2H1	Q9GZK4	316 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PRSS22	Q9GZN4	317 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	WNT5B	Q9H1J7	359 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	SIAE	Q9HAT2	523 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	EDA2R	Q9HAV5	297 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	C20orf141	Q9NUB4	165 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	UFSP2	Q9NUQ7	469 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PRDM4	Q9UKN5	801 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	PPP2R2C	Q9Y2T4	447 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	STARD10	Q9Y365	291 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	DNAJC15	Q9Y5T4	150 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	SMAD5-AS1	Q9Y6J3	95 aa		4.26	□□□□□ -1.73
PTPN4-210	ENST00000485247	KIAA1109	Q2LD37	5005 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TRAV38-1	A0A0B4J264	116 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247		A0A1B0GWA3	101 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TMEM233	B4DJY2	109 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247		G3V2L1	256 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	LGALS8	O00214	317 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	RNF13	O43567	381 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	GLRA3	O75311	464 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	SLC2A10	O95528	541 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	IGF2	P01344	180 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	IGHG1	P01857	330 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	SNRPA	P09012	282 aa	Known RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	MYL2	P10916	166 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TCP1	P17987	556 aa	Known RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	THBS3	P49746	956 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	RAB13	P51153	203 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	LUM	P51884	338 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	MRPS34	P82930	218 aa	Known RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	IL5RA	Q01344	420 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	MAB21L1	Q13394	359 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	MAPK11	Q15759	364 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	HIST3H3	Q16695	136 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	PLA1A	Q53H76	456 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	CLEC12A	Q5QGZ9	265 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	RNF220	Q5VTB9	566 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	C1orf94	Q6P1W5	598 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	COLCA1	Q6ZS62	124 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TMEM219	Q86XT9	240 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	FNDC5	Q8NAU1	212 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	LY6G5B	Q8NDX9	201 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR5J2	Q8NH18	312 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	AEN	Q8WTP8	325 aa	Known RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TWIST2	Q8WVJ9	160 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	NABP1	Q96AH0	204 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	PPP3R2	Q96LZ3	170 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	EPYC	Q99645	322 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	NAPG	Q99747	312 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	C12orf10	Q9HB07	376 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	TIMM10B	Q9Y5J6	103 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	CAPN7	Q9Y6W3	813 aa		4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.25	□□□□□ -1.73
PTPN4-210	ENST00000485247	IGHV3OR15-7	A0A075B7D8	119 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	PRSS51	A0A1B0GVH4	220 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	OOEP	A6NGQ2	149 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	NDUFA2	O43678	99 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	SLC25A17	O43808	307 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	ALDOB	P05062	364 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	SERPINE1	P05121	402 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	FRMD6-AS1	P0C7T7	363 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	DUX4L4	P0CJ87	422 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	ETFA	P13804	333 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	TUBG1	P23258	451 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	FPR3	P25089	353 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	HTR2A	P28223	471 aa		4.24	□□□□□ -1.73
PTPN4-210	ENST00000485247	LAP3	P28838	519 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms