RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GJC3Q8NFK1 279 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ERGIC1Q969X5 290 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF570Q96NI8 536 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 NUAK2Q9H093 628 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 DPAGT1Q9H3H5 408 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 C16orf95Q9H693 158 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 NMNAT1Q9HAN9 279 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-206ENST00000483030 SMURF1Q9HCE7 757 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ATPIF1Q9UII2 106 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 RPS6KA6Q9UK32 745 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 FAM96BQ9Y3D0 163 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 A0A087WUU8 490 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 LINC00854A0A1B0GVQ3 168 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 C5orf63A6NC05 138 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 F5H5K5 113 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 FXYD1O00168 92 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 SOCS2O14508 198 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 FFAR1O14842 300 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 EREGO14944 169 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 OR10H3O60404 316 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 PTP4A3O75365 173 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 GYPAP02724 150 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 CA6P23280 308 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 CD200P41217 278 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 SELENOWP63302 87 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 HIST1H3AP68431 136 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 EGR3Q06889 387 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 KRR1Q13601 381 aaKnown RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 GK2Q14410 553 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 OR8G1Q15617 311 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 KCNJ8Q15842 424 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 FAM189A2Q15884 450 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 KCNMB1Q16558 191 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 BEAN1Q3B7T3 259 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 BEND6Q5SZJ8 279 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 HIST2H3PS2Q5TEC6 136 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 DHRS7BQ6IAN0 325 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 Q6ZPA2 131 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 COLCA1Q6ZS62 124 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 TMPRSS11FQ6ZWK6 438 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 MBOAT2Q6ZWT7 520 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 HIST2H3AQ71DI3 136 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 BTN2A1Q7KYR7 527 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 RRM2BQ7LG56 351 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 VTCN1Q7Z7D3 282 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 LDLRAD3Q86YD5 345 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 OFCC1Q8IZS5 231 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 NKAIN3Q8N8D7 197 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 FAM156AQ8NDB6 213 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 OR8J3Q8NGG0 315 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 SPRYD4Q8WW59 207 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 DYDC1Q8WWB3 177 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 ACOT11Q8WXI4 607 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 LZICQ8WZA0 190 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 SLCO4A1Q96BD0 722 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 TSSK2Q96PF2 358 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 COQ7Q99807 217 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 HDHD2Q9H0R4 259 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 SEMA6AQ9H2E6 1030 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 VCX3BQ9H321 246 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 CNTD2Q9H8S5 307 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 FN3KRPQ9HA64 309 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 VSX1Q9NZR4 365 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-206ENST00000483030 TAGLN3Q9UI15 199 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 LHFPL6Q9Y693 200 aa6.09□□□□□ -1.43
CSDE1-206ENST00000483030 TRAV38-1A0A0B4J264 116 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 BTBD17A6NE02 478 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 OOEPA6NGQ2 149 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 CD300LBA8K4G0 201 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 DCTN6O00399 190 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 DVL1O14640 695 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 NDUFA2O43678 99 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 FCN3O75636 299 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 B3GALNT1O75752 331 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 TSPAN9O75954 239 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 NDUFB2O95178 105 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 ECDO95905 644 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-206ENST00000483030 LCATP04180 440 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 IFNW1P05000 195 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 ACSM4P0C7M7 580 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 SDHAP31040 664 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 TGFBR2P37173 567 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 CDKN2AP42771 156 aaKnown RBP6.08□□□□□ -1.44
CSDE1-206ENST00000483030 MNAT1P51948 309 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 PRB3Q04118 309 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-206ENST00000483030 DBPQ10586 325 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-206ENST00000483030 MALLQ13021 153 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 CDONQ4KMG0 1287 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 AGBL2Q5U5Z8 902 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 GPR139Q6DWJ6 353 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 SLC35E4Q6ICL7 350 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 ZNF826PQ6ZT77 177 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 PTCHD4Q6ZW05 846 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 PGAP1Q75T13 922 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 VMO1Q7Z5L0 202 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 OR2T12Q8NG77 320 aa6.08□□□□□ -1.44
CSDE1-206ENST00000483030 LRTOMTQ8WZ04 291 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms