RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
COL9A2-207ENST00000482722 MFNGO00587 321 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 DUS4LO95620 317 aaKnown RBP12.77□□□□□ -0.37
COL9A2-207ENST00000482722 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
COL9A2-207ENST00000482722 STARD6P59095 220 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 SGCAQ16586 387 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 JAGN1Q8N5M9 183 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 ZNF321PQ8N8H1 164 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 ZDHHC22Q8N966 263 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 C19orf47Q8N9M1 422 aaKnown RBP12.77□□□□□ -0.37
COL9A2-207ENST00000482722 ZNF563Q8TA94 476 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 KIRREL1Q96J84 757 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
COL9A2-207ENST00000482722 INTS14Q96SY0 518 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 MAP3K3Q99759 626 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 TIMM10BQ9Y5J6 103 aa12.77□□□□□ -0.37
COL9A2-207ENST00000482722 WIPF3A6NGB9 483 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 PRAMEF26H0Y7S4 382 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 CLDN4O14493 209 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 ARRB1P49407 418 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-207ENST00000482722 OR2B8PP59922 312 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 PFDN5Q99471 154 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 NMES1Q9C002 83 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 PNO1Q9NRX1 252 aaKnown RBP12.76□□□□□ -0.37
COL9A2-207ENST00000482722 B9D1Q9UPM9 204 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 WIF1Q9Y5W5 379 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 SPTY2D1-AS1A0A0U1RR47 76 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 NPIPB9F8W1W9 429 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 FOXS1O43638 330 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 FBXO24O75426 580 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 GPX4P36969 197 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-207ENST00000482722 GPR3P46089 330 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 SLC6A9P48067 706 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 EGR4Q05215 589 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 EGR3Q06889 387 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 MFGE8Q08431 387 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-207ENST00000482722 AWAT1Q58HT5 328 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 C1QL3Q5VWW1 255 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 ADGRE4PQ86SQ3 457 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 GAL3ST4Q96RP7 486 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 GGACTQ9BVM4 153 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 MMP25Q9NPA2 562 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 ZNF107Q9UII5 783 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-207ENST00000482722 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 DMRT1Q9Y5R6 373 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 ASPMQ8IZT6 3477 aa12.76□□□□□ -0.37
COL9A2-207ENST00000482722 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 PPIHO43447 177 aaKnown RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 LY86O95711 162 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 NUDT14O95848 222 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 SPARCP09486 303 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 RAB5AP20339 215 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 HRH1P35367 487 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 KLHL26Q53HC5 615 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 GPBAR1Q8TDU6 330 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 RNF128Q8TEB7 428 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 OR8D2Q9GZM6 311 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 PRR13Q9NZ81 148 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 FREM3P0C091 2139 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 C7orf77A4D0Y5 90 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 AP4M1O00189 453 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 CD2P06729 351 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 LAP3P28838 519 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 CSNK1EP49674 416 aaKnown RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 KIAA0895LQ68EN5 471 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 ADAM5Q6NVV9 412 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 RTN4RL2Q86UN3 420 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 LRRC75AQ8NAA5 344 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 KLHDC7BQ96G42 594 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 OCSTAMPQ9BR26 566 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 C20orf24Q9BUV8 137 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 LRRC61Q9BV99 259 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 NUDT9Q9BW91 350 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 NRSN2Q9GZP1 204 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 TMPRSS5Q9H3S3 457 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 UBE2ZQ9H832 354 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 PRDM6Q9NQX0 595 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 TMEM184BQ9Y519 407 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 PHYHO14832 338 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 LMX1BO60663 402 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 ADAP1O75689 374 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 CX3CR1P49238 355 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
COL9A2-207ENST00000482722 MARCH3Q86UD3 253 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 MARCH1Q8TCQ1 289 aa12.75□□□□□ -0.37
COL9A2-207ENST00000482722 SLC25A36Q96CQ1 311 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms