RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 DOC2BQ14184 412 aa8.82□□□□□ -1
USP39-215ENST00000481409 ESPL1Q14674 2120 aa8.82□□□□□ -1
USP39-215ENST00000481409 ACSM3Q53FZ2 586 aa8.82□□□□□ -1
USP39-215ENST00000481409 ZMAT1Q5H9K5 638 aa8.82□□□□□ -1
USP39-215ENST00000481409 TMEM108Q6UXF1 575 aa8.82□□□□□ -1
USP39-215ENST00000481409 KRT74Q7RTS7 529 aa8.82□□□□□ -1
USP39-215ENST00000481409 ZFP41Q8N8Y5 198 aa8.82□□□□□ -1
USP39-215ENST00000481409 PLPP7Q8NBV4 271 aa8.82□□□□□ -1
USP39-215ENST00000481409 OR8B12Q8NGG6 310 aa8.82□□□□□ -1
USP39-215ENST00000481409 C12orf43Q96C57 262 aaKnown RBP8.82□□□□□ -1
USP39-215ENST00000481409 BBC3Q96PG8 261 aaPredicted RBP8.82□□□□□ -1
USP39-215ENST00000481409 TMED9Q9BVK6 235 aa8.82□□□□□ -1
USP39-215ENST00000481409 BCL2L14Q9BZR8 327 aa8.82□□□□□ -1
USP39-215ENST00000481409 SLITRK2Q9H156 845 aa8.82□□□□□ -1
USP39-215ENST00000481409 NEK6Q9HC98 313 aa8.82□□□□□ -1
USP39-215ENST00000481409 TXNL4BQ9NX01 149 aaKnown RBP8.82□□□□□ -1
USP39-215ENST00000481409 GTF2A1LQ9UNN4 478 aa8.82□□□□□ -1
USP39-215ENST00000481409 FOXJ3Q9UPW0 622 aa8.82□□□□□ -1
USP39-215ENST00000481409 DHDHQ9UQ10 334 aa8.82□□□□□ -1
USP39-215ENST00000481409 LOC100509620A0A075B734 347 aa8.81□□□□□ -1
USP39-215ENST00000481409 PNMA8CA0A1B0GUJ8 204 aa8.81□□□□□ -1
USP39-215ENST00000481409 LOC107986453A0A1B0GWG9 222 aa8.81□□□□□ -1
USP39-215ENST00000481409 MEGF11A6BM72 1044 aa8.81□□□□□ -1
USP39-215ENST00000481409 H3BMQ9 156 aa8.81□□□□□ -1
USP39-215ENST00000481409 PDCD5O14737 125 aa8.81□□□□□ -1
USP39-215ENST00000481409 SYT7O43581 403 aa8.81□□□□□ -1
USP39-215ENST00000481409 DHRS3O75911 302 aa8.81□□□□□ -1
USP39-215ENST00000481409 ALX3O95076 343 aa8.81□□□□□ -1
USP39-215ENST00000481409 IL1AP01583 271 aa8.81□□□□□ -1
USP39-215ENST00000481409 ZNF35P13682 527 aa8.81□□□□□ -1
USP39-215ENST00000481409 FSTP19883 344 aa8.81□□□□□ -1
USP39-215ENST00000481409 DDOSTP39656 456 aa8.81□□□□□ -1
USP39-215ENST00000481409 MTNR1BP49286 362 aa8.81□□□□□ -1
USP39-215ENST00000481409 IDH3GP51553 393 aaPredicted RBP8.81□□□□□ -1
USP39-215ENST00000481409 TAB1Q15750 504 aa8.81□□□□□ -1
USP39-215ENST00000481409 TMEM91Q6ZNR0 172 aa8.81□□□□□ -1
USP39-215ENST00000481409 FAM57BQ71RH2 274 aa8.81□□□□□ -1
USP39-215ENST00000481409 PGAP1Q75T13 922 aa8.81□□□□□ -1
USP39-215ENST00000481409 CEACAM19Q7Z692 300 aa8.81□□□□□ -1
USP39-215ENST00000481409 FTMTQ8N4E7 242 aa8.81□□□□□ -1
USP39-215ENST00000481409 PARP16Q8N5Y8 322 aa8.81□□□□□ -1
USP39-215ENST00000481409 OR5D14Q8NGL3 314 aa8.81□□□□□ -1
USP39-215ENST00000481409 PP6455Q8WZ26 134 aa8.81□□□□□ -1
USP39-215ENST00000481409 TMEM203Q969S6 136 aa8.81□□□□□ -1
USP39-215ENST00000481409 RADILQ96JH8 1075 aa8.81□□□□□ -1
USP39-215ENST00000481409 TECTBQ96PL2 329 aa8.81□□□□□ -1
USP39-215ENST00000481409 KCNS3Q9BQ31 491 aa8.81□□□□□ -1
USP39-215ENST00000481409 CHCHD6Q9BRQ6 235 aa8.81□□□□□ -1
USP39-215ENST00000481409 OR51E2Q9H255 320 aa8.81□□□□□ -1
USP39-215ENST00000481409 EXOSC4Q9NPD3 245 aaKnown RBP8.81□□□□□ -1
USP39-215ENST00000481409 CKLFQ9UBR5 152 aa8.81□□□□□ -1
USP39-215ENST00000481409 PRRC2CQ9Y520 2896 aaKnown RBP8.81□□□□□ -1
USP39-215ENST00000481409 TRBV5-7A0A0A0MS05 114 aa8.8□□□□□ -1
USP39-215ENST00000481409 LOC100506127A0A0U1RQW1 187 aa8.8□□□□□ -1
USP39-215ENST00000481409 ANKRD61A6NGH8 418 aa8.8□□□□□ -1
USP39-215ENST00000481409 TBX1O43435 398 aa8.8□□□□□ -1
USP39-215ENST00000481409 GOSR1O95249 250 aa8.8□□□□□ -1
USP39-215ENST00000481409 ATE1O95260 518 aa8.8□□□□□ -1
USP39-215ENST00000481409 CRYAAP02489 173 aa8.8□□□□□ -1
USP39-215ENST00000481409 DBHP09172 617 aa8.8□□□□□ -1
USP39-215ENST00000481409 CECR9P0C854 216 aa8.8□□□□□ -1
USP39-215ENST00000481409 SELEP16581 610 aa8.8□□□□□ -1
USP39-215ENST00000481409 CCKARP32238 428 aa8.8□□□□□ -1
USP39-215ENST00000481409 MAP2K3P46734 347 aa8.8□□□□□ -1
USP39-215ENST00000481409 RPS23P62266 143 aaKnown RBP8.8□□□□□ -1
USP39-215ENST00000481409 TSC22D1Q15714 1073 aa8.8□□□□□ -1
USP39-215ENST00000481409 IGFBP7Q16270 282 aa8.8□□□□□ -1
USP39-215ENST00000481409 HSD17B12Q53GQ0 312 aa8.8□□□□□ -1
USP39-215ENST00000481409 NCCRP1Q6ZVX7 275 aaPredicted RBP8.8□□□□□ -1
USP39-215ENST00000481409 SERPINA12Q8IW75 414 aa8.8□□□□□ -1
USP39-215ENST00000481409 CDH26Q8IXH8 852 aa8.8□□□□□ -1
USP39-215ENST00000481409 CSNK2A3Q8NEV1 391 aa8.8□□□□□ -1
USP39-215ENST00000481409 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
USP39-215ENST00000481409 OR51E1Q8TCB6 317 aa8.8□□□□□ -1
USP39-215ENST00000481409 TSEN15Q8WW01 171 aaKnown RBP8.8□□□□□ -1
USP39-215ENST00000481409 TMEM106AQ96A25 262 aa8.8□□□□□ -1
USP39-215ENST00000481409 DERL3Q96Q80 235 aa8.8□□□□□ -1
USP39-215ENST00000481409 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
USP39-215ENST00000481409 NOX3Q9HBY0 568 aa8.8□□□□□ -1
USP39-215ENST00000481409 TCF7L1Q9HCS4 588 aa8.8□□□□□ -1
USP39-215ENST00000481409 ABCB9Q9NP78 766 aa8.8□□□□□ -1
USP39-215ENST00000481409 BRD7Q9NPI1 651 aa8.8□□□□□ -1
USP39-215ENST00000481409 GPR84Q9NQS5 396 aa8.8□□□□□ -1
USP39-215ENST00000481409 ZNF275Q9NSD4 429 aaPredicted RBP8.8□□□□□ -1
USP39-215ENST00000481409 SNTG1Q9NSN8 517 aa8.8□□□□□ -1
USP39-215ENST00000481409 V9GYS6 101 aa8.8□□□□□ -1
USP39-215ENST00000481409 ATRXP46100 2492 aa8.8□□□□□ -1
USP39-215ENST00000481409 MYO7BQ6PIF6 2116 aa8.8□□□□□ -1
USP39-215ENST00000481409 IGHV1-18A0A0C4DH31 117 aa8.79□□□□□ -1
USP39-215ENST00000481409 A0A1B0GTI1 187 aa8.79□□□□□ -1
USP39-215ENST00000481409 VSTM5A8MXK1 200 aa8.79□□□□□ -1
USP39-215ENST00000481409 C1QL1O75973 258 aa8.79□□□□□ -1
USP39-215ENST00000481409 ERCC1P07992 297 aaPredicted RBP8.79□□□□□ -1
USP39-215ENST00000481409 SRMP19623 302 aa8.79□□□□□ -1
USP39-215ENST00000481409 CCNOP22674 350 aa8.79□□□□□ -1
USP39-215ENST00000481409 THBS4P35443 961 aa8.79□□□□□ -1
USP39-215ENST00000481409 SOX6P35712 828 aa8.79□□□□□ -1
USP39-215ENST00000481409 UQCRFS1P47985 274 aa8.79□□□□□ -1
USP39-215ENST00000481409 SERPINB10P48595 397 aa8.79□□□□□ -1
USP39-215ENST00000481409 CAPZA1P52907 286 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms