RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	MYL2	P10916	166 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF35	P13682	527 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF250	P15622	560 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB3A	P20336	220 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	KITLG	P21583	273 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	F2R	P25116	425 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	PSMB5	P28074	263 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	NAA10	P41227	235 aa	Predicted RBP	1	□□□□□ -2.25
CCNL1-223	ENST00000481173	SSR4	P51571	173 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	P2RX1	P51575	399 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	VSX2	P58304	361 aa	Predicted RBP	1	□□□□□ -2.25
CCNL1-223	ENST00000481173	DNAJC3	Q13217	504 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	PSMD5	Q16401	504 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	TCEAL5	Q5H9L2	206 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	TEX30	Q5JUR7	227 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	PLCXD3	Q63HM9	321 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	LRRC66	Q68CR7	880 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMCO2	Q7Z6W1	182 aa	Predicted RBP	1	□□□□□ -2.25
CCNL1-223	ENST00000481173	VTCN1	Q7Z7D3	282 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	GABRG1	Q8N1C3	465 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	JAGN1	Q8N5M9	183 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	TTC29	Q8NA56	475 aa	Predicted RBP	1	□□□□□ -2.25
CCNL1-223	ENST00000481173	BPIFC	Q8NFQ6	507 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR5T1	Q8NG75	326 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	AGR3	Q8TD06	166 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	LRRC29	Q8WV35	223 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	TCEAL3	Q969E4	200 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	C12orf42	Q96LP6	360 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	CFAP53	Q96M91	514 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	JSRP1	Q96MG2	331 aa	Predicted RBP	1	□□□□□ -2.25
CCNL1-223	ENST00000481173	AUNIP	Q9H7T9	357 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZC4H2	Q9NQZ6	224 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	IFNK	Q9P0W0	207 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	PISD	Q9UG56	409 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	SLC7A8	Q9UHI5	535 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	ING4	Q9UNL4	249 aa		1	□□□□□ -2.25
CCNL1-223	ENST00000481173	DENND4A	Q7Z401	1863 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	NSD2	O96028	1365 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	IGHV1-3	A0A0C4DH29	117 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	KBTBD11-OT1	A0A1B0GTJ5	212 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173		A0A1W2PPE3	182 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173		A0A1W2PPV9	198 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	NCF1B	A6NI72	391 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR5H1	A6NKK0	313 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	GOLGA8J	A6NMD2	632 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	CENPX	A8MT69	81 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	NCF1C	A8MVU1	366 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	SUPT3H	B4E1H0	165 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	C4orf51	C9J302	202 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	GOLGA8T	H3BQL2	631 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173		M0R3G1	203 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	TRDMT1	O14717	391 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB29	O14966	203 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	DNAJB6	O75190	326 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	CLIC3	O95833	236 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	FGF4	P08620	206 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	PABPC4L	P0CB38	370 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	GOLGA8H	P0CJ92	632 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR8G3P	P0DMU2	310 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	CD37	P11049	281 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	PRKACA	P17612	351 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	MSR1	P21757	451 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	STOM	P27105	288 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	HNRNPH3	P31942	346 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	NUP62	P37198	522 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	UQCRFS1	P47985	274 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	IDH2	P48735	452 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMED10	P49755	219 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	CCNH	P51946	323 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	EIF3E	P60228	445 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMED1	Q13445	227 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	GK3P	Q14409	553 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	DMC1	Q14565	340 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	MAD2L1BP	Q15013	274 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	QPRT	Q15274	297 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	HADH	Q16836	314 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	PGGHG	Q32M88	737 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	YIF1B	Q5BJH7	314 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	PPM1L	Q5SGD2	360 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	UBE2U	Q5VVX9	321 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	C22orf42	Q6IC83	251 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMEM53	Q6P2H8	277 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	CERS6	Q6ZMG9	384 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMEM150A	Q86TG1	271 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	KATNAL2	Q8IYT4	538 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	IQCK	Q8N0W5	287 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	PDCL2	Q8N4E4	241 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	COX18	Q8N8Q8	333 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	SDR9C7	Q8NEX9	313 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR10AD1	Q8NGE0	317 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR52K1	Q8NGK4	314 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR1S2	Q8NGQ3	325 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF502	Q8TBZ5	544 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	SLC7A13	Q8TCU3	470 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	ELMO1	Q92556	727 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	ISG20	Q96AZ6	181 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	XPO6	Q96QU8	1125 aa	Known RBP	0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR5B12	Q96R08	314 aa		0.99	□□□□□ -2.25
CCNL1-223	ENST00000481173	ATP5S	Q99766	215 aa		0.99	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms