RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ACTG2P63267 376 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 GK2Q14410 553 aaPredicted RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 SMN1Q16637 294 aaKnown RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 PCGF3Q3KNV8 242 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 SNAI3Q3KNW1 292 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 ZNF684Q5T5D7 378 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 SHEQ5VZ18 495 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 FAM57BQ71RH2 274 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 PGAP1Q75T13 922 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 RFLNBQ8N5W9 214 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 NEU4Q8WWR8 484 aaPredicted RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 SPSB4Q96A44 273 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 PERPQ96FX8 193 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 PGAM5Q96HS1 289 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 MOB1AQ9H8S9 216 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 FGF20Q9NP95 211 aaPredicted RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 NKIRAS2Q9NYR9 191 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 MRM2Q9UI43 246 aaKnown RBP11.95□□□□□ -0.5
PCIF1-202ENST00000479348 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 RAB26Q9ULW5 256 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 TEX15Q9BXT5 2789 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
PCIF1-202ENST00000479348 LRBAP50851 2863 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 C17orf100A8MU93 164 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 PRR32B1ATL7 298 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 PSMD9O00233 223 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 TBX1O43435 398 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
PCIF1-202ENST00000479348 MYF6P23409 242 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 DCKP27707 260 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 DDOSTP39656 456 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 ZNF81P51508 661 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 MMP15P51511 669 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 ZNF85Q03923 595 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 ZNF92Q03936 586 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 GALEQ14376 348 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 HLXQ14774 488 aaPredicted RBP11.94□□□□□ -0.5
PCIF1-202ENST00000479348 TIGD6Q17RP2 521 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 CDONQ4KMG0 1287 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 GLYATL3Q5SZD4 288 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 SSX6Q7RTT6 188 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 FAM220AQ7Z4H9 259 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 YIPF7Q8N8F6 280 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 OR52I1Q8NGK6 324 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 SORCS2Q96PQ0 1159 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 TTTY10Q9BZA0 68 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 BRD7Q9NPI1 651 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 CNOT2Q9NZN8 540 aaKnown RBP11.94□□□□□ -0.5
PCIF1-202ENST00000479348 USF3Q68DE3 2245 aa11.94□□□□□ -0.5
PCIF1-202ENST00000479348 A0A0U1RQV5 110 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 EFCAB10A6NFE3 127 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 LOC110117498-PIK3R3F6TDL0 507 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 SRSF10O75494 262 aaKnown RBP11.93□□□□□ -0.5
PCIF1-202ENST00000479348 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 PIPP12273 146 aaPredicted RBP11.93□□□□□ -0.5
PCIF1-202ENST00000479348 MED21Q13503 144 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 SNCBQ16143 134 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 TMEM255AQ5JRV8 349 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 FAM209AQ5JX71 171 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 LIPNQ5VXI9 398 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 SYS1Q8N2H4 156 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 HAVCR2Q8TDQ0 301 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 SGK3Q96BR1 496 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 MYOZ1Q9NP98 299 aaPredicted RBP11.93□□□□□ -0.5
PCIF1-202ENST00000479348 NUFIP1Q9UHK0 495 aaKnown RBP11.93□□□□□ -0.5
PCIF1-202ENST00000479348 ITGB1BP2Q9UKP3 347 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 MYRFQ9Y2G1 1151 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
PCIF1-202ENST00000479348 N6AMT1Q9Y5N5 214 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 R4GMQ9 66 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 ARID1AO14497 2285 aa11.93□□□□□ -0.5
PCIF1-202ENST00000479348 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 GGT3PA6NGU5 568 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 CD300LBA8K4G0 201 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 FAM20BO75063 409 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 NAT2P11245 290 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 DSCR9P59020 149 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 MRPL28Q13084 256 aaKnown RBP11.92□□□□□ -0.5
PCIF1-202ENST00000479348 TESK1Q15569 626 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 ALKBH6Q3KRA9 238 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 LAIR2Q6ISS4 152 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 OR8B12Q8NGG6 310 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 OR13G1Q8NGZ3 307 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 SPRYD4Q8WW59 207 aaPredicted RBP11.92□□□□□ -0.5
PCIF1-202ENST00000479348 REEP6Q96HR9 211 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 ZNF184Q99676 751 aaPredicted RBP11.92□□□□□ -0.5
PCIF1-202ENST00000479348 PBOV1Q9GZY1 135 aa11.92□□□□□ -0.5
PCIF1-202ENST00000479348 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms