RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TRAV40A0A0B4J280 105 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 KIR2DS1A0A191URI9 304 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 POM121CA8CG34 1229 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 CD300LBA8K4G0 201 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 TNFRSF11BO00300 401 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 XRCC2O43543 280 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 IFNGP01579 166 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 APOC1P02654 83 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 FMO3P31513 532 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 CD80P33681 288 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 SLC15A1P46059 708 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 TUSC1Q2TAM9 212 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 SLC35F1Q5T1Q4 408 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 TECTBQ96PL2 329 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 MUC13Q9H3R2 512 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 FN3KQ9H479 309 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 CD300AQ9UGN4 299 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 ARL2BPQ9Y2Y0 163 aa12.08□□□□□ -0.48
SMARCE1-209ENST00000478349 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 IGHV3-64DA0A0J9YX35 117 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF878C9JN71 531 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 LGALS8O00214 317 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 FAM20BO75063 409 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 CCNB2O95067 398 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF205O95201 554 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 PLATP00750 562 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 CA6P23280 308 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 CFL1P23528 166 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 GRK5P34947 590 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 DDOSTP39656 456 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 PAX2Q02962 417 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 SNCBQ16143 134 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 WDR25Q64LD2 544 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 RASSF6Q6ZTQ3 369 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 ARHGAP24Q8N264 748 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 OR2T33Q8NG76 320 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 PNRC2Q9NPJ4 139 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 UFSP2Q9NUQ7 469 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 PCDHGB1Q9Y5G3 927 aa12.07□□□□□ -0.48
SMARCE1-209ENST00000478349 A0A1B0GUS0 222 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 A6NLC8 198 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 RIIAD1A6NNX1 92 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 ANKRD30BLA7E2S9 258 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 BHLHE40O14503 412 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 SPARCP09486 303 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 EGR1P18146 543 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 OTX1P32242 354 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 ENTPD1P49961 510 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 HMGA2P52926 109 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 GRB2P62993 217 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 MAB21L1Q13394 359 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 GK3PQ14409 553 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 OR8B8Q15620 311 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 DEFB107AQ8IZN7 70 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 MAP6Q96JE9 813 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 DUX5Q96PT3 197 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 TOR3AQ9H497 397 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 MAGIXQ9H6Y5 334 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 EGLN3Q9H6Z9 239 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF696Q9H7X3 374 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 NOX4Q9NPH5 578 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 MRPL22Q9NWU5 206 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 IL20Q9NYY1 176 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 ACTR3BQ9P1U1 418 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 LYVE1Q9Y5Y7 322 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 COMMD3-BMI1R4GMX3 469 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
SMARCE1-209ENST00000478349 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 P2RY10O00398 339 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 PTBP3O95758 552 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 CRYBA1P05813 215 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF3P17036 446 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 HSD11B1P28845 292 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 PYCR1P32322 319 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 PSMB10P40306 273 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 FGF12P61328 243 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 HNRNPA0Q13151 305 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 METTL11BQ5VVY1 283 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 PRAMEF6Q5VXH4 476 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 BCL6BQ8N143 479 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 LNX2Q8N448 690 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 CYB561A3Q8NBI2 242 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 OR8S1Q8NH09 359 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 SLAMF6Q96DU3 332 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 KCNJ15Q99712 375 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms