RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LINC00346Q8IVM7 164 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CYB561A3Q8NBI2 242 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 SLC37A3Q8NCC5 494 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 OR1F12Q8NHA8 337 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 RDH5Q92781 318 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 OTULINQ96BN8 352 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 MSI2Q96DH6 328 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 RNFT2Q96EX2 444 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 WACQ9BTA9 647 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 ELOVL3Q9HB03 270 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 AMBNQ9NP70 447 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 MRPS18AQ9NVS2 196 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 CHCHD3Q9NX63 227 aaKnown RBP7.06□□□□□ -1.28
HDAC6-221ENST00000477561 TREM2Q9NZC2 230 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 STARD10Q9Y365 291 aa7.06□□□□□ -1.28
HDAC6-221ENST00000477561 PLSCR5A0PG75 271 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 DPPA5A6NC42 116 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 TVP23AA6NH52 213 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 A6NHS1 94 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 WNT9BO14905 357 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 PPIHO43447 177 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 HTR1AP08908 422 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 COX5BP10606 129 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 MYL12AP19105 171 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 DCKP27707 260 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RBMXP38159 391 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RPS27P42677 84 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 GPR6P46095 362 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 GZMKP49863 264 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF81P51508 661 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 SLC25A1P53007 311 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RPS7P62081 194 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 PSG7Q13046 419 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 HNRNPA0Q13151 305 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 TBCEQ15813 527 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 NEDD8Q15843 81 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 KCNMB1Q16558 191 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 MOGQ16653 247 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 KLHL12Q53G59 568 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RNLSQ5VYX0 342 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 MBNL2Q5VZF2 373 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ARL9Q6T311 187 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 UNQ6126/PRO20091Q6UXV3 157 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 IL17RELQ6ZVW7 336 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 BCDIN3DQ7Z5W3 292 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 NPEPL1Q8NDH3 523 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 GJC3Q8NFK1 279 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 SLC26A10Q8NG04 563 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 OR51L1Q8NGJ5 315 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 OR9Q1Q8NGQ5 310 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ZNRF4Q8WWF5 429 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RORBQ92753 470 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 CMBLQ96DG6 245 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 MYCBPQ99417 103 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 CDADC1Q9BWV3 514 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 CDCA4Q9BXL8 241 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RACGAP1Q9H0H5 632 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 OR51V1Q9H2C8 321 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 MSL2Q9HCI7 577 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 FGF20Q9NP95 211 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF275Q9NSD4 429 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 DECR2Q9NUI1 292 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 HAO2Q9NYQ3 351 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 PTTG3PQ9NZH4 202 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 DIMT1Q9UNQ2 313 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ERGIC3Q9Y282 383 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
HDAC6-221ENST00000477561 LHFPL6Q9Y693 200 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 CACNG2Q9Y698 323 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 RTTNQ86VV8 2226 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 SVEP1Q4LDE5 3571 aa7.05□□□□□ -1.28
HDAC6-221ENST00000477561 ABCA1O95477 2261 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 NAV3Q8IVL0 2385 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 OR6C6A6NF89 314 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ZSCAN5BA6NJL1 495 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 FAM183AA6NL82 134 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MYL12BO14950 172 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 TIMM8AO60220 97 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 LMX1BO60663 402 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 NOL3O60936 208 aaKnown RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 RP2O75695 350 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 TGFAP01135 160 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MT-ND5P03915 603 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 GYPBP06028 91 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 TACSTD2P09758 323 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 PCMT1P22061 227 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ACHEP22303 614 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 SLC2A5P22732 501 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 C21orf33P30042 268 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-221ENST00000477561 MMP15P51511 669 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 BLVRAP53004 296 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ACTC1P68032 377 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 ACTA1P68133 377 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 HIST1H3AP68431 136 aa7.04□□□□□ -1.28
HDAC6-221ENST00000477561 EMX1Q04741 257 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms