RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CNEP1R1Q8N9A8 125 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 CLEC1AQ8NC01 280 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 OR1J2Q8NGS2 313 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 THOC3Q96J01 351 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MRGPRX4Q96LA9 322 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PIGQQ9BRB3 760 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 NXT1Q9UKK6 140 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 A0A1B0GUH1 482 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 H3BMH7 237 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 EIF1BO60739 113 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF254O75437 659 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PMS2P2O95744 297 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PPP3CBP16298 524 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 M6PRP20645 277 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 THBS2P35442 1172 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 ARG2P78540 354 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 CYCSP99999 105 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PCK2Q16822 640 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 NR2C2APQ86WQ0 139 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MUC20Q8N307 709 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MCTS1Q9ULC4 181 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ANKUB1A6NFN9 424 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ABHD16AO95870 558 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 RHBDD2Q6NTF9 364 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 BRICD5Q6PL45 260 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 OR2AE1Q8NHA4 323 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF721Q8TF20 911 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 SLC25A43Q8WUT9 341 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 KISS1RQ969F8 398 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 PLXNA3P51805 1871 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 LAMA3Q16787 3333 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 H7C2Y5 167 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 PIN1P1O15428 100 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 NXPH3O95157 252 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 GIPP09681 153 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 OR8U9P0C7N5 309 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 RPA2P15927 270 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 INSM1Q01101 510 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ZBTB37Q5TC79 503 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 TEX261Q6UWH6 196 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 RAB11FIP2Q7L804 512 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 SUMF1Q8NBK3 374 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ST8SIA4Q92187 359 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 NICN1Q9BSH3 213 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ZCCHC4Q9H5U6 513 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 DLL4Q9NR61 685 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 MTFP1Q9UDX5 166 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF230Q9UIE0 474 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 U3KQ87 197 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 PCNX1Q96RV3 2341 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 ANAPC1Q9H1A4 1944 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 S100A9P06702 114 aaKnown RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 CPT2P23786 658 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 FZD5Q13467 585 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 CEBPEQ15744 281 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 WIPI1Q5MNZ9 446 aaPredicted RBP9.86□□□□□ -0.83
COL27A1-204ENST00000477421 LRRTM1Q86UE6 522 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 OR10R2Q8NGX6 335 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 OXGR1Q96P68 337 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 METTL9Q9H1A3 318 aa9.86□□□□□ -0.83
COL27A1-204ENST00000477421 KLF4O43474 513 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CELA2AP08217 269 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ADH6P28332 368 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 UBE2NP61088 152 aaKnown RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 IFITM2Q01629 132 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 IAH1Q2TAA2 248 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 SFRP5Q5T4F7 317 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ANKRD16Q6P6B7 361 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 OGFOD3Q6PK18 319 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 KMT5CQ86Y97 462 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 C20orf196Q8IYI0 205 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 D2HGDHQ8N465 521 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 OR4D10Q8NGI6 311 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 MAFAQ8NHW3 353 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 TTC9Q92623 222 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 LIN37Q96GY3 246 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CNTD2Q9H8S5 307 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 B3GNT2Q9NY97 397 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 IGKV1D-42A0A075B6H8 117 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ZNHIT1O43257 154 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 NDUFB6O95139 128 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF205O95201 554 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 PNPP00491 289 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF806P0C7X5 589 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 EPHA8P29322 1005 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CSF2RBP32927 897 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 AGFG1P52594 562 aaKnown RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 TAS2R31P59538 309 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CDC20BQ86Y33 519 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CPT1CQ8TCG5 803 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 PPP1R1CQ8WVI7 109 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 LIPHQ8WWY8 451 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 RASL10BQ96S79 203 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 SYT3Q9BQG1 590 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 SLCO5A1Q9H2Y9 848 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 LRFN1Q9P244 771 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms