RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ZNF302	Q9NR11	478 aa		2.43	□□□□□ -2.02
RBM39-231	ENST00000477334	OPN4	Q9UHM6	478 aa		2.43	□□□□□ -2.02
RBM39-231	ENST00000477334	RCL1	Q9Y2P8	373 aa	Known RBP	2.43	□□□□□ -2.02
RBM39-231	ENST00000477334	KIF26A	Q9ULI4	1882 aa	Predicted RBP	2.43	□□□□□ -2.02
RBM39-231	ENST00000477334	IGHV5-10-1	A0A0J9YXX1	117 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	SMKR1	H3BMG3	65 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	RFXANK	O14593	260 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	SCAMP2	O15127	329 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	NUPL2	O15504	423 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	DPM1	O60762	260 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	MPDU1	O75352	247 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	RAB3D	O95716	219 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	BCHE	P06276	602 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	DCN	P07585	359 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	ARR3	P36575	388 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CFHR2	P36980	270 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	AQP2	P41181	271 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CSK	P41240	450 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CSNK1A1	P48729	337 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	MAP3K7CL	P57077	242 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TFDP2	Q14188	446 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TSC22D1	Q15714	1073 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	GABRA6	Q16445	453 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	C5orf47	Q569G3	176 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TPTE2P1	Q5T6R2	138 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	ANKRD22	Q5VYY1	191 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	PDPK2P	Q6A1A2	396 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	RWDD4	Q6NW29	188 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	PID1	Q7Z2X4	250 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	FAM122B	Q7Z309	247 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	MRPL55	Q7Z7F7	128 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	UNC93A	Q86WB7	457 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	RIMKLA	Q8IXN7	391 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	KIF2B	Q8N4N8	673 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CBR4	Q8N4T8	237 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TM4SF18	Q96CE8	201 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TRNT1	Q96Q11	434 aa	Known RBP	2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	MICU1	Q9BPX6	476 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	SLC25A2	Q9BXI2	301 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	NDEL1	Q9GZM8	345 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	RAB1B	Q9H0U4	201 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	KIR3DX1	Q9H7L2	352 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	C12orf10	Q9HB07	376 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	ANKH	Q9HCJ1	492 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CD209	Q9NNX6	404 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	TMEM9B	Q9NQ34	198 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	CD300A	Q9UGN4	299 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	MROH7	Q68CQ1	1323 aa		2.42	□□□□□ -2.02
RBM39-231	ENST00000477334	GOLGA8Q	A0A0J9YX86	632 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SLC25A14	O95258	325 aa	Predicted RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	HLA-DPB1	P04440	258 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ARG1	P05089	322 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	TPM3	P06753	285 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ADRA2A	P08913	450 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ZNF286B	P0CG31	522 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	TCP1	P17987	556 aa	Known RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	F2R	P25116	425 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	NPY1R	P25929	384 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	HTR2C	P28335	458 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	NBL1	P41271	181 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ESRRG	P62508	458 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	TPM4	P67936	248 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SLC25A11	Q02978	314 aa	Known RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SYCN	Q0VAF6	134 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	STX3	Q13277	289 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	XRCC4	Q13426	336 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ART3	Q13508	389 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	OR7A5	Q15622	319 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	C5orf64	Q2M2E5	130 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	RPEL1	Q2QD12	228 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	UBE2U	Q5VVX9	321 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	FBXW9	Q5XUX1	488 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	OR4D6	Q8NGJ1	314 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	OR2A1	Q8NGT9	310 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	OR6N2	Q8NGY6	317 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	OR51F2	Q8NH61	342 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	PDCD6IP	Q8WUM4	868 aa	Known RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	APH1B	Q8WW43	257 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	RBMXL1	Q96E39	390 aa	Known RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	NRBF2	Q96F24	287 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	GPR21	Q99679	349 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	TMEM38A	Q9H6F2	299 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	UBE2Z	Q9H832	354 aa	Predicted RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SPACA1	Q9HBV2	294 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	PRSS16	Q9NQE7	514 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SIRT7	Q9NRC8	400 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	ZNF355P	Q9NSJ1	428 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	CLN6	Q9NWW5	311 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	UVRAG	Q9P2Y5	699 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	RBMX2	Q9Y388	322 aa	Known RBP	2.41	□□□□□ -2.02
RBM39-231	ENST00000477334		V9GYY9	64 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	MAPK8IP3	Q9UPT6	1336 aa		2.41	□□□□□ -2.02
RBM39-231	ENST00000477334	SLC22A20	A6NK97	555 aa		2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.4	□□□□□ -2.03
RBM39-231	ENST00000477334		H3BN98	237 aa		2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	BET1	O15155	118 aa		2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	RRP8	O43159	456 aa	Known RBP	2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	SRP72	O76094	671 aa	Known RBP	2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	TDP2	O95551	362 aa		2.4	□□□□□ -2.03
RBM39-231	ENST00000477334	RHOC	P08134	193 aa		2.4	□□□□□ -2.03

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