RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SCAND2PQ9GZW5 306 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SLC22A4Q9H015 551 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 METTL9Q9H1A3 318 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 MFSD1Q9H3U5 465 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 GAREM1Q9H706 876 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 NT5DC2Q9H857 520 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SIAEQ9HAT2 523 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PLEKHA3Q9HB20 300 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ZDHHC4Q9NPG8 344 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ACP6Q9NPH0 428 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 FBXO6Q9NRD1 293 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 CTPS2Q9NRF8 586 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 DDX19AQ9NUU7 478 aaKnown RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 NLE1Q9NVX2 485 aaPredicted RBP2.43□□□□□ -2.02
HMGN4-202ENST00000477243 C11orf21Q9P2W6 132 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 KLK11Q9UBX7 282 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 PRODH2Q9UF12 536 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SPATA2Q9UM82 520 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 TCF19Q9Y242 345 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 ARL5AQ9Y689 179 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 MTCH2Q9Y6C9 303 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 KDM3BQ7LBC6 1761 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
HMGN4-202ENST00000477243 RLFQ13129 1914 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 APCP25054 2843 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 BCORQ6W2J9 1755 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 NID2Q14112 1375 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RTL9Q8NET4 1388 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TRAV8-7A0A075B6U6 113 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 IGLV5-45A0A087WSX0 123 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF816-ZNF321PA0A0X1KG74 233 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RPS10-NUDT3A0A1W2PQS6 291 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ASPDHA6ND91 283 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RBMY1BA6NDE4 496 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RBMY1EA6NEQ0 496 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF487B1APH4 448 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 B4DXG7 233 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 E5RJQ4 531 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 NPIPB8E9PQR5 432 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LOC110117498-PIK3R3F6TDL0 507 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 H3BNX3 289 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 K7EN84 100 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SULT2B1O00204 365 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 FCN1O00602 326 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SLC9A3R1O14745 358 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MSTNO14793 375 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TNFSF12O43508 249 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MGRN1O60291 552 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 GLSO94925 669 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 NDUFB8O95169 186 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SERPINA1P01009 418 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CATP04040 527 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RLN2P04090 185 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ISG15P05161 165 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SNRPCP09234 159 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 GNAO1P09471 354 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 H2AFZP0C0S5 128 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ACSM4P0C7M7 580 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RBMY1DP0C7P1 496 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LINC00271P0C7V0 271 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 NHLRC4P0CG21 123 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CT45A6P0DMU7 189 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CT45A5P0DMU8 189 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CT45A7P0DMV0 189 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 IL9P15248 144 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CBR1P16152 277 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CD36P16671 472 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SDC1P18827 310 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TBPP20226 339 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RAB5AP20339 215 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 PVALBP20472 110 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 F8A1P23610 371 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 OR1E1P30953 314 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RPA3P35244 121 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 HRH1P35367 487 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 PTH2RP49190 550 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CYB561P49447 251 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 HOXA1P49639 335 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 EFNA3P52797 238 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 OR4D2P58180 307 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ERVK-16P61578 105 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF85Q03923 595 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 PRKCDQ05655 676 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MLLT11Q13015 90 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SRSF6Q13247 344 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SLC39A6Q13433 755 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RAB31Q13636 194 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 FASTKQ14296 549 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM187Q14656 261 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 PTGR1Q14914 329 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ABRAXAS2Q15018 415 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TAB1Q15750 504 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TTLL9Q3SXZ7 439 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF260Q3ZCT1 412 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CARD16Q5EG05 197 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CT45A1Q5HYN5 189 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CCNJQ5T5M9 372 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LCE2AQ5TA79 106 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms