RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 H1FXQ92522 213 aaKnown RBP12.36□□□□□ -0.43
SMG5-204ENST00000476954 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 MPP4Q96JB8 637 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 HCAR1Q9BXC0 346 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 RMND5AQ9H871 391 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 ADA2Q9NZK5 511 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 LHBP01229 141 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 TFF1P04155 84 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 GRPP07492 148 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
SMG5-204ENST00000476954 AANATQ16613 207 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
SMG5-204ENST00000476954 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 ARSJQ5FYB0 599 aaPredicted RBP12.35□□□□□ -0.43
SMG5-204ENST00000476954 NCR3LG1Q68D85 454 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 NKAIN4Q8IVV8 208 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
SMG5-204ENST00000476954 TMEM255BQ8WV15 326 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 UBLCP1Q8WVY7 318 aaPredicted RBP12.35□□□□□ -0.43
SMG5-204ENST00000476954 MYDGFQ969H8 173 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 PRR25Q96S07 402 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 IKZF5Q9H5V7 419 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
SMG5-204ENST00000476954 hCG_1807616A0A1W2PRN6 198 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 A6NLC8 198 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 ACOT8O14734 319 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 SERPINB7O75635 380 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 DGCR2P98153 550 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 AQP6Q13520 282 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 PCK2Q16822 640 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 DYNAPQ8N1N2 210 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 SLCO4A1Q96BD0 722 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 WACQ9BTA9 647 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 ADAT1Q9BUB4 502 aaKnown RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 METTL8Q9H825 291 aaKnown RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 GRPEL1Q9HAV7 217 aa12.34□□□□□ -0.43
SMG5-204ENST00000476954 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 SF3B6Q9Y3B4 125 aaKnown RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 TSSC4Q9Y5U2 329 aaPredicted RBP12.34□□□□□ -0.43
SMG5-204ENST00000476954 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
SMG5-204ENST00000476954 NDUFB3O43676 98 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 SLC1A6P48664 564 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 POLR2JP52435 117 aaKnown RBP12.33□□□□□ -0.44
SMG5-204ENST00000476954 CTXN1P60606 82 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 WHAMMP3Q1A5X7 153 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 MSANTD1Q6ZTZ1 278 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 LRRC75AQ8NAA5 344 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 FNDC8Q8TC99 324 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 SPRYD4Q8WW59 207 aaPredicted RBP12.33□□□□□ -0.44
SMG5-204ENST00000476954 ACOT11Q8WXI4 607 aaPredicted RBP12.33□□□□□ -0.44
SMG5-204ENST00000476954 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 GPR61Q9BZJ8 451 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 TCF19Q9Y242 345 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 NDUFAF1Q9Y375 327 aa12.33□□□□□ -0.44
SMG5-204ENST00000476954 A6NDX4 124 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 IFNW1P05000 195 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 ANOS1P23352 680 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 ECH1Q13011 328 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 KHDC1LQ5JSQ8 128 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 IFT20Q8IY31 132 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 GOLGA6L1Q8N7Z2 621 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 LRRC29Q8WV35 223 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 LIPHQ8WWY8 451 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 DUS3LQ96G46 650 aaKnown RBP12.32□□□□□ -0.44
SMG5-204ENST00000476954 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 ELL3Q9HB65 397 aaPredicted RBP12.32□□□□□ -0.44
SMG5-204ENST00000476954 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 HIF3AQ9Y2N7 669 aa12.32□□□□□ -0.44
SMG5-204ENST00000476954 PLECQ15149 4684 aaKnown RBP12.31□□□□□ -0.44
SMG5-204ENST00000476954 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 M0QX08 132 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 M0R1W7 72 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 CLIC3O95833 236 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 CTLA4P16410 223 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 TGM4P49221 684 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 C11orf53Q8IXP5 236 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 MICU2Q8IYU8 434 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
SMG5-204ENST00000476954 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
SMG5-204ENST00000476954 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 CD300LBA8K4G0 201 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 IMPA2O14732 288 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 TYROBPO43914 113 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 IDO1P14902 403 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 CD247P20963 164 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 MICBQ29980 383 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 CORO6Q6QEF8 472 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
SMG5-204ENST00000476954 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms