RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 CTNSO60931 367 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 SC5DO75845 299 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 TRAPPC6AO75865 159 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 PTTG1O95997 202 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 APOA1P02647 267 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 THRAP10827 490 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 RAB3AP20336 220 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 HOXA9P31269 272 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 CD70P32970 193 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 HCAR3P49019 387 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 UCNP55089 124 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 WNT4P56705 351 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 SLC35B1P78383 322 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 GINS1Q14691 196 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 KIR2DS1Q14954 304 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 TMEM205Q6UW68 189 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 CD300LGQ6UXG3 332 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 TMPRSS11AQ6ZMR5 421 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 COX18Q8N8Q8 333 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 Q8N976 141 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 NTAN1Q96AB6 310 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 ELSPBP1Q96BH3 223 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 BTN2A3PQ96KV6 586 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 GABRG3Q99928 467 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 UTP23Q9BRU9 249 aaKnown RBP3.64□□□□□ -1.83
SDHB-205ENST00000475506 OSBPL11Q9BXB4 747 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 ZNF442Q9H7R0 627 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 RGS18Q9NS28 235 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 RBAKQ9NYW8 714 aaPredicted RBP3.64□□□□□ -1.83
SDHB-205ENST00000475506 RPS6KB2Q9UBS0 482 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 TRMT112Q9UI30 125 aaKnown RBP3.64□□□□□ -1.83
SDHB-205ENST00000475506 POFUT2Q9Y2G5 429 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 OR51B2Q9Y5P1 312 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 V9GYY9 64 aa3.64□□□□□ -1.83
SDHB-205ENST00000475506 IGLV11-55A0A075B6I3 123 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 A0A0A6YYD5 115 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 INS-IGF2F8WCM5 200 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 RP2O75695 350 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 GCGP01275 180 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 HLA-DPB1P04440 258 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 BCHEP06276 602 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
SDHB-205ENST00000475506 PRKACBP22694 351 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 AP1S2P56377 157 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 TAS2R39P59534 338 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 OR2B8PP59922 312 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 UBE2NP61088 152 aaKnown RBP3.63□□□□□ -1.83
SDHB-205ENST00000475506 XRCC4Q13426 336 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 VAMP3Q15836 100 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 TFDP3Q5H9I0 405 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 FAM92BQ6ZTR7 304 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 NDUFAF7Q7L592 441 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 SNX20Q7Z614 316 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 CDKL3Q8IVW4 592 aaPredicted RBP3.63□□□□□ -1.83
SDHB-205ENST00000475506 ZNF433Q8N7K0 673 aaPredicted RBP3.63□□□□□ -1.83
SDHB-205ENST00000475506 C15orf56Q8N910 161 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 MNS1Q8NEH6 495 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 OR4D6Q8NGJ1 314 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 OR51A7Q8NH64 312 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 RNF138Q8WVD3 245 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 GLT1D1Q96MS3 346 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 ZIM3Q96PE6 472 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 MED4Q9NPJ6 270 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 CES1P1Q9UKY3 287 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 KLF12Q9Y4X4 402 aa3.63□□□□□ -1.83
SDHB-205ENST00000475506 AQRO60306 1485 aaKnown RBP eCLIP3.62□□□□□ -1.831e-10■■□□□ 13.9
SDHB-205ENST00000475506 CEP164Q9UPV0 1460 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 IGHV3OR16-9A0A0B4J2B5 98 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 IGHV3-66A0A0C4DH42 116 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 A0A1B0GVX0 72 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 RAB19A4D1S5 217 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 TVP23AA6NH52 213 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 PDZK1P1A8MUH7 402 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 HSBP1L1C9JCN9 74 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 SLC25A27O95847 323 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 GLAP06280 429 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 TCN2P20062 427 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 GGT2P36268 569 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 UBE2AP49459 152 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 HCCSP53701 268 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 CDKN2DP55273 166 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
SDHB-205ENST00000475506 MADCAM1Q13477 382 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 TNXAQ16473 311 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 Q6ZVH6 145 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 COPS6Q7L5N1 327 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 DAW1Q8N136 415 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 RCN3Q96D15 328 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 FAM19A4Q96LR4 140 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 SAMD10Q9BYL1 202 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 PARP12Q9H0J9 701 aaKnown RBP3.62□□□□□ -1.83
SDHB-205ENST00000475506 NOX3Q9HBY0 568 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 TREM1Q9NP99 234 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
SDHB-205ENST00000475506 FAM49BQ9NUQ9 324 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 CLEC2DQ9UHP7 191 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms