RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 NAA10P41227 235 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-223ENST00000475146 CX3CR1P49238 355 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 SRP9P49458 86 aaKnown RBP20.3■□□□□ 0.84
CPNE1-223ENST00000475146 DVL1P1P54792 670 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-223ENST00000475146 ESRRGP62508 458 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 ZNF92Q03936 586 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 PTGES3Q15185 160 aaKnown RBP20.3■□□□□ 0.84
CPNE1-223ENST00000475146 SLC35D3Q5M8T2 416 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 GLYATL3Q5SZD4 288 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 OR51F2Q8NH61 342 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 MEGF10Q96KG7 1140 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 PRRG3Q9BZD7 231 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 GABARAPL1Q9H0R8 117 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 SEMA6AQ9H2E6 1030 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 TOR3AQ9H497 397 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 NPTNQ9Y639 398 aa20.3■□□□□ 0.84
CPNE1-223ENST00000475146 ANK3Q12955 4377 aaKnown RBP20.3■□□□□ 0.84
CPNE1-223ENST00000475146 GGT3PA6NGU5 568 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 F5H5P2 479 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 TBX1O43435 398 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 IFNA2P01563 188 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 HLA-DPB1P04440 258 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 ANXA2P07355 339 aaKnown RBP20.29■□□□□ 0.84
CPNE1-223ENST00000475146 RBMXP38159 391 aaKnown RBP20.29■□□□□ 0.84
CPNE1-223ENST00000475146 APOFQ13790 326 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 RNF133Q8WVZ7 376 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 AMELYQ99218 206 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 UBAP1Q9NZ09 502 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 DNAJC27Q9NZQ0 273 aa20.29■□□□□ 0.84
CPNE1-223ENST00000475146 TMEFF2Q9UIK5 374 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-223ENST00000475146 DYSFO75923 2080 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 IGHV3-64DA0A0J9YX35 117 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 CD300LBA8K4G0 201 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 IGHV2-5P01817 119 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 H2BFMP0C1H6 154 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 SBK2P0C263 348 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 SRD5A1P18405 259 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 PCMT1P22061 227 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 SLC2A5P22732 501 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 ZNF454Q8N9F8 522 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 OTOSQ8NHW6 89 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 THEM6Q8WUY1 208 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 TMEM186Q96B77 213 aa20.28■□□□□ 0.84
CPNE1-223ENST00000475146 XRCC2O43543 280 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 APOC1P02654 83 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 LYNP07948 512 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 ANPEPP15144 967 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 OPRL1P41146 370 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 MMP16P51512 607 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 RAD23AP54725 363 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 KDM4DQ6B0I6 523 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 PYDC1Q8WXC3 89 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 CENPNQ96H22 339 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-223ENST00000475146 REPIN1Q9BWE0 567 aaKnown RBP20.27■□□□□ 0.84
CPNE1-223ENST00000475146 GCM1Q9NP62 436 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 HIF1ANQ9NWT6 349 aa20.27■□□□□ 0.84
CPNE1-223ENST00000475146 PRKYO43930 277 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 IGHV2-70P01814 119 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 ZNF121P58317 390 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-223ENST00000475146 OR8G1Q15617 311 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 TIGD6Q17RP2 521 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 LCN1P1Q5VSP4 162 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 FAM57BQ71RH2 274 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-223ENST00000475146 ZNF420Q8TAQ5 688 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-223ENST00000475146 OPA3Q9H6K4 179 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 SP140LQ9H930 580 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 BRD7Q9NPI1 651 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 ENOPH1Q9UHY7 261 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 OAZ3Q9UMX2 235 aa20.26■□□□□ 0.83
CPNE1-223ENST00000475146 NOP16Q9Y3C1 178 aaKnown RBP20.26■□□□□ 0.83
CPNE1-223ENST00000475146 SAC3D1A6NKF1 404 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 IFNL4K9M1U5 179 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 M0R129 80 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 EBAG9O00559 213 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 CA6P23280 308 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 EPHA2P29317 976 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 ACTR3P61158 418 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 BTG1P62324 171 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 KPNB1Q14974 876 aaKnown RBP20.25■□□□□ 0.83
CPNE1-223ENST00000475146 SLX4IPQ5VYV7 408 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 MOGAT3Q86VF5 341 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 OR56B2PQ8NGI1 322 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 SIGLEC11Q96RL6 698 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 CIB1Q99828 191 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 ADAT1Q9BUB4 502 aaKnown RBP20.25■□□□□ 0.83
CPNE1-223ENST00000475146 SLC22A4Q9H015 551 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 LAMP5Q9UJQ1 280 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 PCDHB10Q9UN67 800 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 KLHDC2Q9Y2U9 406 aa20.25■□□□□ 0.83
CPNE1-223ENST00000475146 TRAV20A0A0B4J274 112 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 A0A1B0GWJ7 208 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 CCDC182A6NF36 153 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 ZAR1LA6NP61 321 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 TMEM178BH3BS89 294 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 MRPL3P09001 348 aaKnown RBP20.24■□□□□ 0.83
CPNE1-223ENST00000475146 SRP14P37108 136 aaKnown RBP20.24■□□□□ 0.83
CPNE1-223ENST00000475146 GFOD2Q3B7J2 385 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 RHOUQ7L0Q8 258 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 SLC16A9Q7RTY1 509 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms