RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CBLN3Q6UW01 205 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 H1FNTQ75WM6 255 aaPredicted RBP5.46□□□□□ -1.53
HERC4-209ENST00000473533 FGGYQ96C11 551 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 TMEM41AQ96HV5 264 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 SULT4A1Q9BR01 284 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 TMEM59Q9BXS4 323 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 CNTD2Q9H8S5 307 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 FANCFQ9NPI8 374 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 SOHLH2Q9NX45 425 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 EDARQ9UNE0 448 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 B3GALT5Q9Y2C3 310 aa5.46□□□□□ -1.53
HERC4-209ENST00000473533 MRPS28Q9Y2Q9 187 aaKnown RBP5.46□□□□□ -1.53
HERC4-209ENST00000473533 ARID1AO14497 2285 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 PIGBOS1A0A0B4J2F0 54 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TLCD2A6NGC4 264 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SERPINE3A8MV23 424 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 HRKO00198 91 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ICOSLGO75144 302 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 MED6O75586 246 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SEMA4FO95754 770 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 S100PP25815 95 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 FKBP2P26885 142 aaKnown RBP5.46□□□□□ -1.54
HERC4-209ENST00000473533 CAPZBP47756 277 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 FAM3AP98173 230 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 DEFB110Q30KQ9 67 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 GFOD2Q3B7J2 385 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 BIVMQ86UB2 503 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 LYPD6Q86Y78 171 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 OR4S1Q8NGB4 309 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 OR4D6Q8NGJ1 314 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 MARCH1Q8TCQ1 289 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ASB10Q8WXI3 467 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ZC3H10Q96K80 434 aaKnown RBP5.46□□□□□ -1.54
HERC4-209ENST00000473533 GAL3ST4Q96RP7 486 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 S100A13Q99584 98 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SELENOIQ9C0D9 397 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 OR8D2Q9GZM6 311 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 CENPMQ9NSP4 180 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 LUZP4Q9P127 313 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SRPK3Q9UPE1 567 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 POLR1DQ9Y2S0 133 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TP53BP1Q12888 1972 aaPredicted RBP5.46□□□□□ -1.54
HERC4-209ENST00000473533 VPS13AQ96RL7 3174 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ZNF878C9JN71 531 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TGFBR3LH3BV60 316 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 P2RY10O00398 339 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 OIP5O43482 229 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TSPAN2O60636 221 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ACTL6AO96019 429 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 CLPSP04118 112 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SFTA3P0C7M3 94 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ZNF806P0C7X5 589 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 VSIG8P0DPA2 414 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 MSX1P28360 303 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 GLP1RP43220 463 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 PPM1FP49593 454 aaPredicted RBP5.46□□□□□ -1.54
HERC4-209ENST00000473533 RHEBQ15382 184 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TMEM240Q5SV17 173 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 THEM4Q5T1C6 240 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TMEM88Q6PEY1 159 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 DOK3Q7L591 496 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 GKN2Q86XP6 184 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 SGPP2Q8IWX5 399 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ADPRHL1Q8NDY3 354 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 FNDC9Q8TBE3 224 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ST7LQ8TDW4 575 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 FGF14Q92915 247 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ADIPOR1Q96A54 375 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 ZDHHC12Q96GR4 267 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 C5orf34Q96MH7 638 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 GAL3ST1Q99999 423 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 EGLN1Q9GZT9 426 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 PBOV1Q9GZY1 135 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 TLNRD1Q9H1K6 362 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 RGCCQ9H4X1 137 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 FAM60AQ9NP50 221 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 CHST11Q9NPF2 352 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 CYTL1Q9NRR1 136 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 KCNIP3Q9Y2W7 256 aa5.46□□□□□ -1.54
HERC4-209ENST00000473533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 A0A1W2PQF6 199 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ANKUB1A6NFN9 424 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 K7EPK0 472 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 FARS2O95363 451 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 TSPAN15O95858 294 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 IFNA2P01563 188 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CRYBA1P05813 215 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 FAM157CP0CG43 387 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 RPS27P42677 84 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 FASLGP48023 281 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZNF133P52736 654 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 SUCLG1P53597 346 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 CLDN6P56747 220 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GRB2P62993 217 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 HSD11B2P80365 405 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 QRFPP83859 136 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZP2Q05996 745 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZNF529Q6P280 563 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ANGPTL5Q86XS5 388 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms