RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 MOB1AQ9H8S9 216 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 DYNLRB1Q9NP97 96 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 CYSLTR2Q9NS75 346 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 FAM206AQ9NX38 181 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 TAAR3PQ9P1P4 343 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 ZNF391Q9UJN7 358 aa16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 PURGQ9UJV8 347 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-207ENST00000473420 TMEM269A0A1B0GVZ9 245 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 EFCAB10A6NFE3 127 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 TBX1O43435 398 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 SRSF10O75494 262 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 MT-ND5P03915 603 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 ANOS1P23352 680 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 PTH2RP49190 550 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 GALEQ14376 348 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 NKPD1Q17RQ9 610 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 TMEM255AQ5JRV8 349 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 C6orf141Q5SZD1 244 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 GLYATL3Q5SZD4 288 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 PGAP1Q75T13 922 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 FAM220AQ7Z4H9 259 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 PGAM5Q96HS1 289 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 ERVK13-1Q9NX77 482 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 DIMT1Q9UNQ2 313 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 R4GMQ9 66 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 CSMD2Q7Z408 3487 aa16.24■□□□□ 0.19
CTDSP1-207ENST00000473420 MAGEB4O15481 346 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 TIMM8AO60220 97 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 FAM20BO75063 409 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 TACSTD2P09758 323 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 CFL1P23528 166 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 MMP15P51511 669 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 HLXQ14774 488 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 ZMAT1Q5H9K5 638 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 MRPL21Q7Z2W9 205 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 SYS1Q8N2H4 156 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 GGHQ92820 318 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 FOXC2Q99958 501 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 ZNF649Q9BS31 505 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 REPIN1Q9BWE0 567 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 Q9H521 79 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 BRD7Q9NPI1 651 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 NUFIP1Q9UHK0 495 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 PSORS1C1Q9UIG5 152 aa16.23■□□□□ 0.19
CTDSP1-207ENST00000473420 A0A0U1RQV5 110 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 PLSCR5A0PG75 271 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 C5orf63A6NC05 138 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 IQCF6A8MYZ5 107 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 LOC110117498-PIK3R3F6TDL0 507 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 XPNPEP2O43895 674 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ERCC1P07992 297 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ADRA2AP08913 450 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ALDH3B1P43353 468 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ZNF92Q03936 586 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 MED21Q13503 144 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 TIGD6Q17RP2 521 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 TP53I3Q53FA7 332 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 LIPNQ5VXI9 398 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 BPIFB6Q8NFQ5 453 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 OR8B12Q8NGG6 310 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 OR2AE1Q8NHA4 323 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ITFG2Q969R8 447 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 SGK3Q96BR1 496 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 TMEM80Q96HE8 168 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 ALG8Q9BVK2 526 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 PBOV1Q9GZY1 135 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 RAB1BQ9H0U4 201 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 CXXC4Q9H2H0 198 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 BARX1Q9HBU1 254 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 FKBP14Q9NWM8 211 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 GNG8Q9UK08 70 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 EXOSC1Q9Y3B2 195 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 N6AMT1Q9Y5N5 214 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 SNX5Q9Y5X3 404 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 CHD3Q12873 2000 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 NOTCH2Q04721 2471 aa16.22■□□□□ 0.19
CTDSP1-207ENST00000473420 SLC1A7O00341 560 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 DENRO43583 198 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 CCDC159P0C7I6 412 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 LIMS3P0CW19 117 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 LIMS4P0CW20 117 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 MFGE8Q08431 387 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 MRPL28Q13084 256 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 ALKBH6Q3KRA9 238 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 LHFPL3Q86UP9 236 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 HAVCR2Q8TDQ0 301 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 NEU4Q8WWR8 484 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 REEP6Q96HR9 211 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 CNBD2Q96M20 576 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 SIGLEC11Q96RL6 698 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 DIRC2Q96SL1 478 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 VRK1Q99986 396 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 RHNO1Q9BSD3 238 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 G6PC2Q9NQR9 355 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 ACOXLQ9NUZ1 547 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 SCN3BQ9NY72 215 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 NKIRAS2Q9NYR9 191 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 ZNF319Q9P2F9 582 aa16.21■□□□□ 0.19
CTDSP1-207ENST00000473420 hCG_38984A0A1B0GV85 526 aa16.2■□□□□ 0.18
CTDSP1-207ENST00000473420 C17orf100A8MU93 164 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms