RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 KCNJ15Q99712 375 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 C1QTNF5Q9BXJ0 243 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 MMADHCQ9H3L0 296 aaPredicted RBP9.76□□□□□ -0.85
CPNE1-222ENST00000473373 H2AFY2Q9P0M6 372 aaPredicted RBP9.76□□□□□ -0.85
CPNE1-222ENST00000473373 A0A0G2JMP0 313 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 A0A0X1KG70 313 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 F5H5P2 479 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 H0YL77 283 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 IFNL4K9M1U5 179 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 XRCC2O43543 280 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 GLCEO94923 617 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 IGHV2-5P01817 119 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 APOC1P02654 83 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 HLA-DPB1P04440 258 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 FASP25445 335 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 CX3CR1P49238 355 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 LCN2P80188 198 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 GK2Q14410 553 aaPredicted RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 SPRNQ5BIV9 151 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 LCN1P1Q5VSP4 162 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM236Q5W0B7 351 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 Q6ZR03 302 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 MOGAT3Q86VF5 341 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 MUC20Q8N307 709 aaPredicted RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 OR4M2Q8NGB6 313 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 OR5K1Q8NHB7 308 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF420Q8TAQ5 688 aaPredicted RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 PGAM5Q96HS1 289 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 MEGF10Q96KG7 1140 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 ADAT1Q9BUB4 502 aaKnown RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 TOR3AQ9H497 397 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 PNRC2Q9NPJ4 139 aaKnown RBP9.75□□□□□ -0.85
CPNE1-222ENST00000473373 KRT84Q9NSB2 600 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 TVP23BQ9NYZ1 205 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
CPNE1-222ENST00000473373 A6NLC8 198 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 ANKRD30BLA7E2S9 258 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 G3V2T6 193 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 PHF1O43189 567 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 PLPP2O43688 288 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 FOXH1O75593 365 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 PNPP00491 289 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 LYNP07948 512 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 FCGR1AP12314 374 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 CA6P23280 308 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 NAA10P41227 235 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 LMO4P61968 165 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 BTG1P62324 171 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 MZT1Q08AG7 82 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 SNAI3Q3KNW1 292 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 ESCO2Q56NI9 601 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 GLYATL3Q5SZD4 288 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF362Q5T0B9 420 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 LIPNQ5VXI9 398 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 FAM57BQ71RH2 274 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 KRT77Q7Z794 578 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 ZDHHC13Q8IUH4 622 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 CPOQ8IVL8 374 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 BOLLQ8N9W6 283 aaKnown RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 OR8S1Q8NH09 359 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 NRBF2Q96F24 287 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 SLC30A2Q9BRI3 323 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 NMNAT2Q9BZQ4 307 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 OPA3Q9H6K4 179 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 METTL17Q9H7H0 456 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 DDX28Q9NUL7 540 aaKnown RBP9.74□□□□□ -0.85
CPNE1-222ENST00000473373 UFSP2Q9NUQ7 469 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 ENOPH1Q9UHY7 261 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 LAMP5Q9UJQ1 280 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 AP4S1Q9Y587 144 aa9.74□□□□□ -0.85
CPNE1-222ENST00000473373 CUBNO60494 3623 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 hCG_1807616A0A1W2PRN6 198 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 CD300LBA8K4G0 201 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 PRODHO43272 600 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 SELENOFO60613 162 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF205O95201 554 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
CPNE1-222ENST00000473373 GNALP38405 381 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 MDH2P40926 338 aaKnown RBP9.73□□□□□ -0.85
CPNE1-222ENST00000473373 MMP16P51512 607 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 CRISP1P54107 249 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 ZNF92Q03936 586 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 APOFQ13790 326 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 TEX30Q5JUR7 227 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 COLCA1Q6ZS62 124 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 AMIGO2Q86SJ2 522 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 PAPD5Q8NDF8 572 aaKnown RBP9.73□□□□□ -0.85
CPNE1-222ENST00000473373 OR10S1Q8NGN2 331 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 DDOQ99489 341 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 ABHD6Q9BV23 337 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 OR10A2Q9H208 303 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 FN3KRPQ9HA64 309 aa9.73□□□□□ -0.85
CPNE1-222ENST00000473373 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms