RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FITM2Q8N6M3 262 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 IQCF1Q8N6M8 205 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SLC37A3Q8NCC5 494 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 GNPDA2Q8TDQ7 276 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 CLPTM1LQ96KA5 538 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 NSMCE2Q96MF7 247 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 WACQ9BTA9 647 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 NSRP1Q9H0G5 558 aaKnown RBP6.72□□□□□ -1.33
USP48-207ENST00000471752 SMURF1Q9HCE7 757 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 IL1RAPQ9NPH3 570 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 MED4Q9NPJ6 270 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 MRGBPQ9NV56 204 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SAMD4AQ9UPU9 718 aaKnown RBP6.72□□□□□ -1.33
USP48-207ENST00000471752 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
USP48-207ENST00000471752 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 FAM183AA6NL82 134 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CD300LBA8K4G0 201 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 ZNF593O00488 134 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 SOX14O95416 240 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 RENP00797 406 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 HKR1P10072 659 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 RPS2P15880 293 aaKnown RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 MDKP21741 143 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 PRTN3P24158 256 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CRABP1P29762 137 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 HCCSP53701 268 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 FGF12P61328 243 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 RELBQ01201 579 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CRMP1Q14194 572 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 KLHL12Q53G59 568 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 ARMCX4Q5H9R4 360 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 DMRTC1Q5HYR2 192 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 LINC01590Q5TEZ4 76 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 WDR25Q64LD2 544 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 HIST2H2BDQ6DRA6 164 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 UNQ6126/PRO20091Q6UXV3 157 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 DCXRQ7Z4W1 244 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CPLX4Q7Z7G2 160 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 C1orf174Q8IYL3 243 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 PGAM4Q8N0Y7 254 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 RAB40AQ8WXH6 277 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 POP5Q969H6 163 aaKnown RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 SGK3Q96BR1 496 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 TBX15Q96SF7 602 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 ATF6BQ99941 703 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 NUDT16L1Q9BRJ7 211 aaKnown RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 RBM4Q9BWF3 364 aaKnown RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 SSBP3Q9BWW4 388 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 NMNAT2Q9BZQ4 307 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 FGF23Q9GZV9 251 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 HDHD2Q9H0R4 259 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 ARMC1Q9NVT9 282 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CGGBP1Q9UFW8 167 aaPredicted RBP6.71□□□□□ -1.34
USP48-207ENST00000471752 TAGLN3Q9UI15 199 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 CDH10Q9Y6N8 788 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 U3KQV3 271 aa6.71□□□□□ -1.34
USP48-207ENST00000471752 B2RBV5 119 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 M0R135 149 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 PLATP00750 562 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GYPAP02724 150 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GRPP07492 148 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SELLP14151 372 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 AMY2BP19961 511 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 TUBG1P23258 451 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GATA3P23771 443 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 FPR2P25090 351 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 OTX1P32242 354 aaPredicted RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 PSMB10P40306 273 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 CD200P41217 278 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GATA4P43694 442 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 PITPNBP48739 271 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SRP9P49458 86 aaKnown RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 RGS6P49758 472 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GNGT1P63211 74 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 ESCO2Q56NI9 601 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 ZMAT1Q5H9K5 638 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SAMD4BQ5PRF9 694 aaKnown RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 PGAP1Q75T13 922 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 FAM90A1Q86YD7 464 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 HS3ST5Q8IZT8 346 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 PARP8Q8N3A8 854 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 GCSAMQ8N6F7 178 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 AQP11Q8NBQ7 271 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 PROKR2Q8NFJ6 384 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 OR56B2PQ8NGI1 322 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 OR5L1Q8NGL2 311 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 OR2AJ1Q8NGZ0 328 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 Q8TCH9 128 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SPRYD4Q8WW59 207 aaPredicted RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 PPP1R14AQ96A00 147 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 UPRTQ96BW1 309 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SLAMF6Q96DU3 332 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 ZNF799Q96GE5 643 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 NIPSNAP1Q9BPW8 284 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms