RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NCMAPQ5T1S8 102 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 OR13F1Q8NGS4 319 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 OR5AK2Q8NH90 309 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 HAVCR2Q8TDQ0 301 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-203ENST00000471658 TMED9Q9BVK6 235 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 NGBQ9NPG2 151 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 PTTG3PQ9NZH4 202 aa16.56■□□□□ 0.24
PSPC1-203ENST00000471658 SF3B6Q9Y3B4 125 aaKnown RBP16.56■□□□□ 0.24
PSPC1-203ENST00000471658 A0A1B0GTI1 187 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 CASKO14936 926 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 BLMHQ13867 455 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 INSL4Q14641 139 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 MEX3BQ6ZN04 569 aaKnown RBP16.55■□□□□ 0.24
PSPC1-203ENST00000471658 SATL1Q86VE3 508 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 APOBEC3DQ96AK3 386 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-203ENST00000471658 OR10A2Q9H208 303 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 MOB1AQ9H8S9 216 aa16.55■□□□□ 0.24
PSPC1-203ENST00000471658 KLF2Q9Y5W3 355 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-203ENST00000471658 DEFB108AA8MXU0 73 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 CCRL2O00421 344 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 GPRIN2O60269 458 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 RPS11P62280 158 aaKnown RBP eCLIP16.54■□□□□ 0.24
PSPC1-203ENST00000471658 ZNF92Q03936 586 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 HLXQ14774 488 aaPredicted RBP16.54■□□□□ 0.24
PSPC1-203ENST00000471658 ZNF544Q6NX49 715 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 OR52H1Q8NGJ2 320 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 OR51A4Q8NGJ6 313 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 OR1J1Q8NGS3 322 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 YIPF6Q96EC8 236 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 KCNS3Q9BQ31 491 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 GPR84Q9NQS5 396 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 CADP27708 2225 aa16.54■□□□□ 0.24
PSPC1-203ENST00000471658 LMX1BO60663 402 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 ICMTO60725 284 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 ATE1O95260 518 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 PLAUP00749 431 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 CD36P16671 472 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 NR4A1P22736 598 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 LOXP28300 417 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-203ENST00000471658 PCSK6P29122 969 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 PPP1CBP62140 327 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 GPR50Q13585 617 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 ADAM5Q6NVV9 412 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 PIK3IP1Q96FE7 263 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 REEP6Q96HR9 211 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 FAM71F1Q96KD3 344 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-203ENST00000471658 HS3ST6Q96QI5 342 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 COMMD4Q9H0A8 199 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 ESRP2Q9H6T0 727 aaKnown RBP16.53■□□□□ 0.24
PSPC1-203ENST00000471658 SP140LQ9H930 580 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 ZNF281Q9Y2X9 895 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 TENM4Q6N022 2769 aa16.53■□□□□ 0.24
PSPC1-203ENST00000471658 HEATR1Q9H583 2144 aaKnown RBP16.53■□□□□ 0.24
PSPC1-203ENST00000471658 LOC107986453A0A1B0GWG9 222 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 TMEM212A6NML5 194 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 IGLV3-1P01715 115 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 CD1AP06126 327 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 SNTB2Q13425 540 aaKnown RBP16.52■□□□□ 0.24
PSPC1-203ENST00000471658 MSMPQ1L6U9 139 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 BEX5Q5H9J7 111 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 SLC22A25Q6T423 547 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 ZNF704Q6ZNC4 412 aaPredicted RBP16.52■□□□□ 0.24
PSPC1-203ENST00000471658 GPR141Q7Z602 305 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 COMMD2Q86X83 199 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 ACBD4Q8NC06 268 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 SLC25A40Q8TBP6 338 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 NEUROG1Q92886 237 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 OR2J1Q9GZK6 312 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 NDUFB11Q9NX14 153 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 FZR1Q9UM11 496 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 COL12A1Q99715 3063 aa16.52■□□□□ 0.24
PSPC1-203ENST00000471658 A0A0U1RQV5 110 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 GADD45AP24522 165 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 RAD52P43351 418 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 NKX6-1P78426 367 aaPredicted RBP16.52■□□□□ 0.23
PSPC1-203ENST00000471658 GK2Q14410 553 aaPredicted RBP16.52■□□□□ 0.23
PSPC1-203ENST00000471658 TMEM244Q5VVB8 128 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 VHLLQ6RSH7 139 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 FAM222BQ8WU58 562 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 TRMT61AQ96FX7 289 aaKnown RBP16.52■□□□□ 0.23
PSPC1-203ENST00000471658 NAA50Q9GZZ1 169 aaKnown RBP16.52■□□□□ 0.23
PSPC1-203ENST00000471658 OR51E2Q9H255 320 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 ATP23Q9Y6H3 246 aa16.52■□□□□ 0.23
PSPC1-203ENST00000471658 ANKHD1Q8IWZ3 2542 aaKnown RBP16.51■□□□□ 0.23
PSPC1-203ENST00000471658 A6NIN4 97 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 SHISA9B4DS77 424 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 ISG15P05161 165 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 CD3EP07766 207 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 UBCP0CG48 685 aaKnown RBP16.51■□□□□ 0.23
PSPC1-203ENST00000471658 MPV17P39210 176 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 PEX19P40855 299 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 FABP5Q01469 135 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 GPR107Q5VW38 600 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 TMEM91Q6ZNR0 172 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 KBTBD8Q8NFY9 601 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 RPL3LQ92901 407 aaKnown RBP16.51■□□□□ 0.23
PSPC1-203ENST00000471658 SPSB4Q96A44 273 aa16.51■□□□□ 0.23
PSPC1-203ENST00000471658 FUNDC2Q9BWH2 189 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms