RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PON2Q15165 354 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 TFDP3Q5H9I0 405 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 ZNF470Q6ECI4 717 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 FAHD1Q6P587 224 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 Q6ZVH6 145 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 DAW1Q8N136 415 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 METTL13Q8N6R0 699 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 PDCD6IPQ8WUM4 868 aaKnown RBP4.59□□□□□ -1.67
SMC5-202ENST00000471372 PYGO2Q9BRQ0 406 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 SPNS1Q9H2V7 528 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 NECAP2Q9NVZ3 263 aa4.59□□□□□ -1.67
SMC5-202ENST00000471372 ANKRD20A5PA0PJZ0 165 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 SNAI2O43623 268 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 CTNSO60931 367 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 GABARAPO95166 117 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 GLAP06280 429 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 PRPS2P11908 318 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 RAB3AP20336 220 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 ARR3P36575 388 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 HCAR3P49019 387 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 TAS2R60P59551 318 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 HERVK_113P61574 105 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 C2orf80Q0P641 193 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 ST3GAL4Q11206 333 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 CDRT4Q8N9R6 151 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 CLHC1Q8NHS4 586 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 TMEM234Q8WY98 164 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 NTAN1Q96AB6 310 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 SLC35E1Q96K37 410 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 ZNF75AQ96N20 296 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 BEX2Q9BXY8 128 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 MYOZ1Q9NP98 299 aaPredicted RBP4.58□□□□□ -1.68
SMC5-202ENST00000471372 ZNF257Q9Y2Q1 563 aa4.58□□□□□ -1.68
SMC5-202ENST00000471372 ARHGAP23Q9P227 1491 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 IGKV1-8A0A0C4DH67 115 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 HAT1O14929 419 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 CDC40O60508 579 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMC5-202ENST00000471372 SS18L1O75177 396 aaPredicted RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 SRSF10O75494 262 aaKnown RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 BRI3O95415 125 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 LIPCP11150 499 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 GGT2P36268 569 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 ZNF136P52737 540 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 UBE2KP61086 200 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 UBE2NP61088 152 aaKnown RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 GINS1Q14691 196 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 EPGNQ6UW88 154 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 COX18Q8N8Q8 333 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 OR6K2Q8NGY2 324 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 ANKRD9Q96BM1 317 aaPredicted RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 TRNT1Q96Q11 434 aaKnown RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 NRTNQ99748 197 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 LINC00597Q9H2U6 94 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 CHMP4BQ9H444 224 aaKnown RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 ZDHHC4Q9NPG8 344 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 ISYNA1Q9NPH2 558 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 MED4Q9NPJ6 270 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 FAM49BQ9NUQ9 324 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 NOSIPQ9Y314 301 aaKnown RBP4.57□□□□□ -1.68
SMC5-202ENST00000471372 HYOU1Q9Y4L1 999 aa4.57□□□□□ -1.68
SMC5-202ENST00000471372 ASTN1O14525 1302 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 TRPC5OSA6NMA1 111 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 H7C2Y5 167 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 LAD1O00515 517 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 B4GALT5O43286 388 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 YEATS4O95619 227 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 PNMA6AP0CW24 399 aaPredicted RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 OMGP23515 440 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 LOXP28300 417 aaPredicted RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 PRLHRP49683 370 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 OR2B6P58173 313 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 MLF1P58340 268 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 NDPQ00604 133 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 PSG7Q13046 419 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 KIR2DS1Q14954 304 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 ZNF239Q16600 458 aaKnown RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 RNF212Q495C1 297 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 CEMP1Q6PRD7 247 aaPredicted RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 SLC30A8Q8IWU4 369 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 SPAG16Q8N0X2 631 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 CYB561A3Q8NBI2 242 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 CCDC12Q8WUD4 166 aaPredicted RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 TMEM239Q8WW34 195 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 TSNAXQ99598 290 aaKnown RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 LLPHQ9BRT6 129 aaKnown RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 NANOGQ9H9S0 305 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 OR2S2Q9NQN1 319 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 MS4A12Q9NXJ0 267 aa4.56□□□□□ -1.68
SMC5-202ENST00000471372 TSSC4Q9Y5U2 329 aaPredicted RBP4.56□□□□□ -1.68
SMC5-202ENST00000471372 MAP3K15Q6ZN16 1313 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 IGLV3-10A0A075B6K4 115 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 IGHV3-74A0A0B4J1X5 117 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 A6NDX4 124 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 ENSAO43768 121 aaKnown RBP4.55□□□□□ -1.68
SMC5-202ENST00000471372 IGLV1-47P01700 117 aa4.55□□□□□ -1.68
SMC5-202ENST00000471372 HLA-DPB1P04440 258 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms