RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 OR51E2Q9H255 320 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CNOT2Q9NZN8 540 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CYB5R1Q9UHQ9 305 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ENPP5Q9UJA9 477 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 N6AMT1Q9Y5N5 214 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 DOCK7Q96N67 2140 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 A0A1B0GUH1 482 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 NKX2-6A6NCS4 301 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 C12orf71A8MTZ7 269 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PSMD9O00233 223 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 HLA-HP01893 362 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CD1AP06126 327 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 MMP7P09237 267 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SPARCP09486 303 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 LIMS3P0CW19 117 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 LIMS4P0CW20 117 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PIPP12273 146 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 NR2C1P13056 603 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CD36P16671 472 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ALOX5APP20292 161 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 MSR1P21757 451 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ANOS1P23352 680 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TGM4P49221 684 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ETV1P50549 477 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF84P51523 738 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TFF3Q07654 80 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CBX3Q13185 183 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SNTB1Q13884 538 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 IRF3Q14653 427 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 MED22Q15528 200 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 STK11Q15831 433 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TIGD6Q17RP2 521 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TBRG1Q3YBR2 411 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TEX30Q5JUR7 227 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF684Q5T5D7 378 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SYT6Q5T7P8 510 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR2G6Q5TZ20 316 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SLC18B1Q6NT16 456 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SLC16A9Q7RTY1 509 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 LHFPL3Q86UP9 236 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SLC35F2Q8IXU6 374 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZFP41Q8N8Y5 198 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 WDR31Q8NA23 367 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZBTB8BQ8NAP8 495 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR10H4Q8NGA5 316 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 LILRB4Q8NHJ6 448 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OTOSQ8NHW6 89 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TBC1D15Q8TC07 691 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ST7LQ8TDW4 575 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ITLN2Q8WWU7 325 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 BOD1Q96IK1 185 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF75AQ96N20 296 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CNN2Q99439 309 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PIGMQ9H3S5 423 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SIAEQ9HAT2 523 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 FGF20Q9NP95 211 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 B3GAT2Q9NPZ5 323 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF69Q9UC07 566 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZDHHC8Q9ULC8 765 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 DIMT1Q9UNQ2 313 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PCDHGB1Q9Y5G3 927 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 FREM1Q5H8C1 2179 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 NBASA2RRP1 2371 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CHD6Q8TD26 2715 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 LOC100506127A0A0U1RQW1 187 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CIB4A0PJX0 185 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 SMIM30A4D0T7 59 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 EFCAB10A6NFE3 127 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 TRIM64BA6NI03 449 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 SNTNA6NMZ2 147 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 J3QRK9 145 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 LALBAP00709 142 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 OR2T7P0C7T2 308 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 OR8G3PP0DMU2 310 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF823P16415 610 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF32P17041 273 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 NPR2P20594 1047 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 PSMB1P20618 241 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CHRNB4P30926 498 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ATP6V1E1P36543 226 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 BLVRAP53004 296 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 TMBIM6P55061 237 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 LSM6P62312 80 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CSNK2BP67870 215 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 HIST1H3AP68431 136 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 PSG4Q00888 419 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 EIF2B1Q14232 305 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 INSL4Q14641 139 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 P2RY6Q15077 328 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 SSX1Q16384 188 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 TSTQ16762 297 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 RSPO1Q2MKA7 263 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 NRN1LQ496H8 165 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 KLHL22Q53GT1 634 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ARMCX4Q5H9R4 360 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 HIST2H3PS2Q5TEC6 136 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 LCN1P1Q5VSP4 162 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms