RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CRYBA2P53672 197 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 SLC18A1P54219 525 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 GMFBP60983 142 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 NFYCQ13952 458 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 GK2Q14410 553 aaPredicted RBP7.47□□□□□ -1.21
CCDC171-204ENST00000470191 MRPL21Q7Z2W9 205 aaKnown RBP7.47□□□□□ -1.21
CCDC171-204ENST00000470191 CALHM3Q86XJ0 350 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 GLB1L2Q8IW92 636 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 NRMQ8IXM6 262 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 OR2T6Q8NHC8 308 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 CFHR4Q92496 578 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 ERGIC1Q969X5 290 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 TPD52L3Q96J77 140 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 ZNF583Q96ND8 569 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 CGREF1Q99674 301 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 SSX3Q99909 188 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 WACQ9BTA9 647 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 KPTNQ9Y664 436 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 GMEB1Q9Y692 573 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 PRSS37A4D1T9 235 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 SOCS2O14508 198 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 ANGPT2O15123 496 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 FBXO24O75426 580 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 KHDRBS3O75525 346 aaKnown RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 ECDO95905 644 aaPredicted RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 IGF2P01344 180 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 TFF1P04155 84 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 CD33P20138 364 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 ECH1Q13011 328 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 MALLQ13021 153 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 IKZF1Q13422 519 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 KRR1Q13601 381 aaKnown RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 FHL1Q13642 323 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 HABP2Q14520 560 aaPredicted RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 VMACQ2NL98 169 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 LRRC23Q53EV4 343 aaPredicted RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 PGAP1Q75T13 922 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 LINC00346Q8IVM7 164 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 CMTM4Q8IZR5 234 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 CELF2-AS1Q8N7Q2 184 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 SPERTQ8NA61 448 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 LRRC8CQ8TDW0 803 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 C17orf50Q8WW18 174 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 RASSF5Q8WWW0 418 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 SEH1LQ96EE3 360 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 TSSK2Q96PF2 358 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 OR5M11Q96RB7 305 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 KAT8Q9H7Z6 458 aaKnown RBP7.46□□□□□ -1.22
CCDC171-204ENST00000470191 NKIRAS1Q9NYS0 192 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 ADA2Q9NZK5 511 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 BAG5Q9UL15 447 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 N6AMT1Q9Y5N5 214 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 LHFPL6Q9Y693 200 aa7.46□□□□□ -1.22
CCDC171-204ENST00000470191 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 A0A1B0GWJ7 208 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 GGT3PA6NGU5 568 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 J3KTA2 159 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 J3QW42 95 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 NDUFA2O43678 99 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 CD14P08571 375 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 ACSM4P0C7M7 580 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 SELLP14151 372 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 MSX2P35548 267 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 GGT2P36268 569 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 KIR2DS4P43632 304 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 MRPL19P49406 292 aaKnown RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 LSM6P62312 80 aaKnown RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 CD69Q07108 199 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 ST3GAL3Q11203 375 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 RSPO1Q2MKA7 263 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 TNFAIP8L3Q5GJ75 292 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 WDR38Q5JTN6 314 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 TBPL2Q6SJ96 375 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 GCSAMQ8N6F7 178 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 Q8N7P7 452 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 GJC3Q8NFK1 279 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 OR5T2Q8NGG2 359 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 OR51G2Q8NGK0 314 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 OR2AE1Q8NHA4 323 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 NPRL2Q8WTW4 380 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 PITX2Q99697 317 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 COQ7Q99807 217 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 CITED2Q99967 270 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 POLR2J2Q9GZM3 115 aaKnown RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 NUAK2Q9H093 628 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 HDHD2Q9H0R4 259 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 POLR2J3Q9H1A7 115 aaKnown RBP7.45□□□□□ -1.22
CCDC171-204ENST00000470191 TRIM36Q9NQ86 728 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 AURKCQ9UQB9 309 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 NDUFAF1Q9Y375 327 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 CAPN7Q9Y6W3 813 aa7.45□□□□□ -1.22
CCDC171-204ENST00000470191 WI2-2373I1.2A0A1W2PRP0 233 aa7.44□□□□□ -1.22
CCDC171-204ENST00000470191 CD300LBA8K4G0 201 aa7.44□□□□□ -1.22
CCDC171-204ENST00000470191 CDC42EP2O14613 210 aa7.44□□□□□ -1.22
CCDC171-204ENST00000470191 NDUFB3O43676 98 aa7.44□□□□□ -1.22
CCDC171-204ENST00000470191 ZNF26P17031 533 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms